AMCG00000332


Basic Information

Item Value
gene id AMCG00000332
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 11836793 ~ 11839680 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000332
AGTTTAAAGTTACATGGAATCACGAACAAGAAAGTAACATCGTAGAgAGTTCATCCACTCCAAGATGAACCCCTGGGATCCGGCACCCTATTCTGTGACAGCAGCGGCCCAGCTGTTGGCCAGATGTGTGGCTTCCGGGGCGCTGTCTGAGGAGAACCTCGAATCTATCCCAAGGGACACAAATGTGTTCTCTCCTCACCTCCTGGAGGCTGAACAAGCTGCAGCCATGAGACGTGAAATTGACGAGAAAAGCTTGGAGGTGGAGCTCTTGCAGCTAGAAAGGGAAGGTGCAGACGTTACCCACTGCTTTTACCTGGCACAGAAGTTTGAGGCTATCCAGCAGTTCACTACTCATCTGCAGGAGGTTCTGCGAGAACAGAGGAGTCTTCGCCAAAGACTGATGAAGCCACTCTGCCAACAGAATCTGCCCATCGAGGCCAACCTGCACAGGCAAATTTTGAGCATGGCGGCCAACTTCATAGAGACCTTAGAGAGCAGCGTGAAGGCCACGCGCTCTATTCCCACCATTGGACCATCAATGACCAATTTGGATCATGCTCTTGCTCAGCTCCTGTCCATGGTAGCAGAAGTAGAGGAGCTGTACAAGCAAGTTCTGGACTGGAAGGATCTGCAGGTGAACACCCATGAATGATCGCCAGCACAAAACTGAGAACACAAAATGTACCATATTCAGCACTCCCAGTTTTAATGGATAGAATTTAGTTAAACATAAGATTGAAATATTGAGTTTTTCAAGGCAGATACAGTCCACTAAATAGTTATTTGCCTTtctattcatacattttctgaaCAACTGCTTGCATTAAACTTTCTGACATATTTAGTGcctgtttataaatatttatttcaaaagagaTTAATTACCTTGCAAGATATAATTTCTGCATTCTTGCAAATTCAGAGTTTACAGTATTTCATAGTTTg

Function

GO:

id name namespace
GO:0051225 spindle assembly biological_process
GO:0070652 HAUS complex cellular_component

KEGG:

id description
K16585 HAUS2; HAUS augmin-like complex subunit 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000332 True 945 mRNA 0.45 7 11836793 11839680

Neighbor

gene id symbol gene type direction distance location
AMCG00000324 jmjd7 coding upstream 102294 11732396 ~ 11734499 (+)
AMCG00000323 NA coding upstream 122175 11704595 ~ 11714618 (+)
AMCG00000326 NA coding upstream 148314 11685554 ~ 11688479 (+)
AMCG00000325 NA coding upstream 157095 11677153 ~ 11679698 (+)
AMCG00000327 NA coding upstream 162106 11672207 ~ 11674687 (+)
AMCG00000353 NA coding downstream 26475 11866155 ~ 11886897 (+)
AMCG00000351 ivd,LOC107719458 coding downstream 194451 12034131 ~ 12041923 (+)
AMCG00000339 NA coding downstream 236376 12076056 ~ 12090893 (+)
AMCG00000340 rpusd2 coding downstream 322311 12161991 ~ 12169461 (+)
AMCG00000346 NA coding downstream 362490 12202170 ~ 12208132 (+)
G149674 NA non-coding upstream 36053 11800000 ~ 11800740 (+)
G149673 NA non-coding upstream 36915 11799561 ~ 11799878 (+)
G149672 NA non-coding upstream 38786 11797375 ~ 11798007 (+)
G149668 NA non-coding upstream 41937 11793367 ~ 11794856 (+)
G149667 NA non-coding upstream 44697 11791871 ~ 11792096 (+)
G149739 NA non-coding downstream 187547 12027227 ~ 12027443 (+)
G149747 NA non-coding downstream 252707 12092387 ~ 12098372 (+)
G149869 LOC105909576,LOC107704376 non-coding downstream 993859 12833539 ~ 12841673 (+)
G150042 NA non-coding downstream 1573185 13412865 ~ 13413064 (+)
G150066 LOC100846954,LOC107575789 non-coding downstream 1809723 13649403 ~ 13650051 (+)
G149525 LOC100846954,LOC107575789 other upstream 1301656 10534590 ~ 10535137 (+)
G149424 NA other upstream 1865992 9969324 ~ 9970801 (+)
AMCG00000281 cpsf2,LOC106608196 other upstream 2245705 9561557 ~ 9591088 (+)
AMCG00000286 sos2 other upstream 2290382 9514822 ~ 9546411 (+)
AMCG00000285 map4k5 other upstream 2350104 9440061 ~ 9486689 (+)
AMCG00000352 NA other downstream 125875 11965555 ~ 11995026 (+)
G149859 NA other downstream 839990 12679670 ~ 12727903 (+)
AMCG00000381 NA other downstream 1127197 12966877 ~ 13030853 (+)
G150069 NA other downstream 1851159 13690839 ~ 13692589 (+)
AMCG00000412 pgf,LOC102799665,LOC102204058,LOC106593515,LOC106611025 other downstream 2293458 14133138 ~ 14153840 (+)

Expression


Co-expression Network