AMCG00000365


Basic Information

Item Value
gene id AMCG00000365
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 12572971 ~ 12579239 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000365
GTGAAACAGCCCGTCTGCAGAGCCGGAGTGCAGATGtattcagaaaaatacaaacttaaaGGAACTAATGCGTGCACTAGGCGGTCTGTGTTTACCTGAAAAATGACCAAACATGACTTCATGACCATGGCATGACACTGATATTGATTCcgagagaaaatacaaattccaCACCGAAAGAAGAGGGAAGCAAGGGGTCGGACAGGATAATGCGCATCTGAGTCGAGAGCAGAGGCTCGGGATGGATGGTTGTGGTCTCCACTCGCTGACTGCAGCCTGCGTTTTGTTCTTTCTCATTATCGGGACTAGCGATGGTACCGAATGCAGTGCTGGATGCAACGCAGAAAACGGATTTTGTGAGAAACCTGGGGAGTGCAGATGCAAACCTGGTTGGCAGGGTCTGACCTGTAGCGAGTGTGTTTCCTATCCCGGCTGTTTACACGGGACGTGCCAGACAGCTTGGCAGTGCATCTGCGACGAAGGATGGGTGGGGAGCCATTGTGACATAGATATCATTACTCTAAGTAACAAGAAGAGTAATTCACTTTTCCTCCCCATGTTTGAGGAAGATATCCACGCGTGTACTGCACAGCCCTGCTCCAATAACTCCACCTGTATCGAAACCGGCGACGGAGGATACATCTGCGTGTGTGCGCAGGGCTACACGGGGGAAAACTGTCACCTCAAAACGGGACCCTGCTTCACCAATGGGTCTCCGTGCCAAAATGGCGGAACGTGCGAGGATGACAATGGGGCTGCAACCCACTCTTCCTGTGTGTGCCCCCCTGGTTTCAATGGCGATTTCTGTGAAATTGATTTAGATGACTGTGAACCTAACCCATGTGTGAATGGGGGGACCTGTGTGGATCATGGACCCAACTACAGTTGTCTTTGTCCCGGGAGGTTCTCTGGCAAAAACTGCAACGACACTCTGGTGCCTTGTGTCAGTAATCCTTGTGAAAACGGAGGAACCTGCCTCAAGCACAGAGACGGAGAATTTCAGTGCTACTGCAAACCAGGCTTTACAGGGAAAACATGCAGCTCCCACAAGATCAGAAACCCCAGACCCTCAGACCAAGAAACCAGCCACTCTCAGCACTACAGCTTGCCATCTCACGTGTTCCACAAGATGATGCATCATCAAGATCGAGAGGTCCTGAAGATCACGATGAAGGAAAGTGTCCACAGCTCCAATACCCTCATCAACAAAAGTCAAGTCATTTGTTTCATTGTGCTTGGCTTACTGACCTGTTTGGTTGTCCTAGGCACAACTGGCATTGTTTTCTTcaacaaatgtgaaatgtggcTGGCGAATGCAAAATACAGCCAGCTTGTGCGAAAGCAGAGGAATCTTTTCTTAAAAACCAACAACGGAGAAGACCACTCAGTGAAAATCATCCTGccagagaaaattaaattgacCAACTATGGAAAACACTACACTTCAATCTGAACTCTCCATCTTGATCTGCTGTCCCCATAACATACttctaaaacatgtaaataatttaGAATTCCACAGACACAAACGCAcctttacaaaacacaagacTTTCACACAAGATTTTCACACCATTGTCAATTTGCAAGGCTATCTAAGACTTGAGATACAATTGCATTGTTTAAccatgataataaaataatgccaCATCTGACTTTAATACTCCTAACTATTATGAAACTGGACTGATATGTACAAAGAAAACTGTCAAAACTGAAGTCCTTTACTATACTTTATTTAGCTGAAGCAAAGTATTGGTTCATCTACTCATCTACTGCTTTGTATGCCTTTATATCCAGCTCCTTCATCATCCAATGGGATTTGATTAGATCATTATGGCAAACAGAAACCATAAATCACAGATGTAATAAATTGAAAGAGCCAGAGTGGTGTAACCCTGGTTTTAGTACTTTtctgggatttaaaaaacaatgacaattgtAGTGAAGACATACTTGTCTGTGACATTCCTTAGACAGTTCTGAATTAAGCTGTACCATtagtctctctgtgtttctagTTTTAGGAGAAATAGTGAAAGTGTTGGCTATATtgtgaatgtttaaaattaagtgttttagAAATGTAGGTCTATAGTCACAAATTCAGTCACAAATTATAAATCCCATTAGCTGATGGCAGCTGTATGTTTGCCAGTAGCTTTTCTAGCTTCCAGCTAATTGTAACCTGCCATCAAATACTGGGAATTGTAGATTGTGATtggcagtttttaatttaatctgggtTTTGTAGAGCAATCCGAAGTACCACTTCAATCAGTATTTTACATCAAATTCTGCCAGTGTTACTTGATGAGCATGAACTGAGACAACAAACTGAAGTGTTGTTATGGTCTGAAGTGGTCTGAAAGATAGCCTCTAAGAGATGCCCTGACTATTTCCCAGGCCGAGATGATTCAGACCTGTAAGGCTTTGAAATGCGCCAAAGTGAACCTAGTGATAAAATTGTGAGATTAAAGTAAAAGCCATTTCTCTGCAGTTGTCATACAACAATCTGCAATGgataataactaagtgatatGATGTCACTGCACTAGCGATCAATGTGAAGTCCCTTTCCTTCTGTCTTTTGGCAATAGACATTTCTTCCAAAGGGTACAATTGGATGCATACTGTACTACAGTCTACCAAAACGTTAATTTCCTAACGTGTTCTTCcagagttttacattttcttacttGGGTAGCACTAATGAACATGTAGTAAAGATCTAACCCCTGCAATCATTCTGTTAATAAGAGTAATCAGAGAAAAGGCACTATGTGGTCATTCAACAACTCTCATGAGAGGCATTACATGAAAAAATGGCATTTGATAACAATGCACTGATCACCATAATTATAGGCCTAATAGTctctttttatcttttatttattttgaatcttCTTGATTCTTGACTTAAGTGATGTGCATTTTGCAGTCAAACCCCTTAATGGCTTTTGTTGAACTTACAGGAGTTTATGTATTTGATGGTTaacactgtaaatatatgaCAGGTTAAAAAAATCGCAGTATTTGATGATGGATTGTATAAGAAACTAGGAAGGCTGCCAACACAATAAAGCATAAGTATTGTGCTGTGGCCTAGACCTCTCTGTGCAGAACAGCATTTTCTGGTGTGATACTAATGAAGAACAGCACCAGATATCAAAGTTAAAGACAAATGGTGGTAGATTCCACTGTGCCTAATGTATTAATAGAACTACTAAGTTACACAGTTTCTAAACATACTGCAATTTACAGACTTTAAATTatggggaaattatttttactcTTTGTCATTAATTTTACCTGCAAAGTAAATTCAACAAATggtgattttcaaagcttttttctttaGAGCAAAATATTATACAAGTTTTCTGAAAGTAGCTGTAAAAAGATGCTAATTGAACGATATAAAATCACAGAGATTGGTAAAATGCAGTGCAACAAAAGACTTTGGAAGTTAAACTGTATTTACTTGTATATAACTCTGAGATTTGTACTTAAGATCAGTTAATGGTAATACACTATGTATAATCaacatatgaaaatatatctacatttgtatttacatcAACATCTATAGGACATTTCACAAAATGCTAATAATGTTAAATTTACCAAAATATGTCATATAGTATTATAGTGCAATGAAATTCCTTTATCTATTGGTCATATACTGTATTGAAAATCATAATGTAATGGCAAGAGATTAAATCCTGAACATCTAGAGGTTATTTAGGATAAAGGCTGAGCCAACAGAATAATAACCAGGGAAGACAAGGACTGTTTGGAAATCACTGAGCCAAGAAGACACTTCcagttaaaatatacagtattagaGACAAGGCTGCCTTTTCCTCTGTGTAATTCATTTTCctcttatttttcatattactATAAATGCTCAATCATAGGAATTTTCATCTGCCTTGAAATTCATGGCGACATGATGGATCATCCATTAAGGGGTTTGATGCATCAAACTGTATTGTGTATAATGTAAAGAAAGATAATAAAGCGCTGTTTAATGTCA

Function

GO: NA

KEGG:

id description
K24461 DLK1; protein delta homolog 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000365 True 4042 mRNA 0.39 6 12572971 12579239

Neighbor

gene id symbol gene type direction distance location
AMCG00000359 NA coding upstream 113033 12430058 ~ 12459938 (+)
AMCG00000358 NA coding upstream 150257 12418779 ~ 12422714 (+)
AMCG00000357 yy1a,LOC108411685,LOC108258103,LOC101066055,LOC108425622 coding upstream 173448 12385408 ~ 12399523 (+)
AMCG00000345 NA coding upstream 208948 12356841 ~ 12364023 (+)
AMCG00000344 LOC106521412,LOC103377579,LOC108270303,LOC102202359,LOC100696514 coding upstream 227272 12344867 ~ 12345699 (+)
AMCG00000366 NA coding downstream 129540 12708779 ~ 12709438 (+)
AMCG00000380 NA coding downstream 158416 12737655 ~ 12750364 (+)
AMCG00000377 NA coding downstream 185033 12764272 ~ 12784236 (+)
AMCG00000376 dync1h1 coding downstream 211141 12790380 ~ 12824958 (+)
AMCG00000368 wdr20,LOC106610634,LOC101173269 coding downstream 299199 12878438 ~ 12884325 (+)
G149747 NA non-coding upstream 474599 12092387 ~ 12098372 (+)
G149739 NA non-coding upstream 545528 12027227 ~ 12027443 (+)
G149674 NA non-coding upstream 772231 11800000 ~ 11800740 (+)
G149673 NA non-coding upstream 773093 11799561 ~ 11799878 (+)
G149672 NA non-coding upstream 774964 11797375 ~ 11798007 (+)
G149869 LOC105909576,LOC107704376 non-coding downstream 254300 12833539 ~ 12841673 (+)
G150042 NA non-coding downstream 833626 13412865 ~ 13413064 (+)
G150066 LOC100846954,LOC107575789 non-coding downstream 1070164 13649403 ~ 13650051 (+)
G150106 NA non-coding downstream 1160537 13739776 ~ 13746116 (+)
G150303 NA non-coding downstream 1885653 14464892 ~ 14465302 (+)
AMCG00000352 NA other upstream 577945 11965555 ~ 11995026 (+)
G149525 LOC100846954,LOC107575789 other upstream 2037834 10534590 ~ 10535137 (+)
G149424 NA other upstream 2602170 9969324 ~ 9970801 (+)
AMCG00000281 cpsf2,LOC106608196 other upstream 2981883 9561557 ~ 9591088 (+)
AMCG00000286 sos2 other upstream 3026560 9514822 ~ 9546411 (+)
G149859 NA other downstream 100431 12679670 ~ 12727903 (+)
AMCG00000381 NA other downstream 387638 12966877 ~ 13030853 (+)
G150069 NA other downstream 1111600 13690839 ~ 13692589 (+)
AMCG00000412 pgf,LOC102799665,LOC102204058,LOC106593515,LOC106611025 other downstream 1553899 14133138 ~ 14153840 (+)
AMCG00000443 esrrb,LOC106611051,LOC101473368,LOC100708924 other downstream 2352539 14931778 ~ 14944400 (+)

Expression


Co-expression Network