AMCG00000367


Basic Information

Item Value
gene id AMCG00000367
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 12943056 ~ 12948495 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000367
agatagaagaataaaaaaataagaattgccAGTGCATAATGGTATGAGATTAGTCATATTTCCTGAAAGCTACgcgtttataataataataatagcaaaagttttatatttttgcactaTATATCTGATCAAAAAGGACACCTAGTACAGTTTATAGTGTATTTAGTTTGTAAGGCAGTTGATCTGTTGGAGTCTGAGCCTTAACAACCGCTTTGTTTGTTAGCTACCATTTCAAAGACCGACACCAGGGTTACAGCAACACAGCACCGTGAACTGTGTAAGTAGACAATGCTTAAACAGTGTTCATGTGGTCATTATTGTGCTTAAAATCGTCATTTCTCTCTCTAATCCAAGATATCTATATACGAATGCGCACTAACTCAGCGGAGGGATACAGTTCGTTTGGAAAGGACGCAAAGTTTGAACGTCTCCAGTGTCTGCAACGAAACACCAACCATGGAGCCCGGATCGAAATATGAAGATTTAAATTTAACCCCAGAAGAGGTGGACCGCTTCAGCAAGGCGTTCAAGGACGAGAAATTCCGGCAGATGCTGTGGGAATATGCCGACGAGATCTCCAACCCGGAGAACAAGAAGAAGTACGAGGAGGAAATCGCGCAGATGGAGCAGGAGAGGGGCATGGACGTCCGATTCATCCACCCCGCGCCGGCCAGAGCCCTGAAGACCAGCGTGGGCGGCGGGCAGAAGTGCTTCATCAACATCTGCACCAACCACCTCATCCACAAGCCGGGGTGCAGGAAGAGTGATGCGGCAGAGGGGATGCATTGGACCCTGCCGTACAGCTTGACCCCGGGGAGGCAAGAAATGGACCCCAAGGGTAACAAGCACTGGATATACGACGTCGTGTTCCACCCCGACACGCTTCACATGGCCGGGAAAAACGACAGGTTTATGAAAATGATTGACAAGACGGCGATGGACGCCATTGAGGAACACTACAATGTCCAACTAGATGAGAGAAACGTCAAGGTGTTGAAAATGAAGTACAAGGGGGTCCCCCATCCCGCAGTGCTTCGCAAACCACTAGCGGACACAGTGACCGAAAAGGAACCGGCTGACCCGAATGACCCTCTGCGGTTCCCGTACCcctataacaacaacaacaacaacaacaacaacacacagaaacacacagtgcCATCAAAATACGTGGACGGTAAAACGGAGAAAGTCACCCCAGACCCAGCAGAACCCGGTCCACCTACGGAACCAAATTATAAGATGAAGTTCAGGTCGTACATTGACTTGCAAGATTACAGGTGTTCCCGCGATTCTGCCCCCAGTCCCCGACCCCGGGAGATCGTCATCACCGTGGACCTGCCTCTGCTCAGCTCCGCGGGGGAAACGGGCCTGGATGTGACCGAGAACCGGCTGCTCTTACAATCCCAGAAACCGGCGTACAGGCTGGACGTGACTTTACCTTACCCCGTGGACGAACAGCAAGGCCATGCCAGATTCATTAAAGGCACCAGACAGCTGGTTGTCACTTTGCCCGTGTTGCCGCTGAAGCAGGACCCGACAGCCGGAGCCGGCGGCCCGCAGCAGGTGGTGAGCGAAGCCCCAACTGGAGACGGCAGTGAACACGAAACCGCCACCTCTCAACTTCCAACATGGCAGGAAAGCAGTATCCCAGATGCCCCTGGAGCTGTAACAAACCACCCTTCATTACAGGTCCAAAATAAAGCATGTGTCACTGTATCCGAAGGCTTGAAGCTGGTTTCTGAATTGACAGAGTCGGCGATTGATGAGAGTCCAGATGTGTCTGAACCCCCAAACCACAACTGCGATGTCCCGCCATTCACTTCGGAGAGGGACGAGGTGACCGCAGACTGTGATGTGCATGGCCAAGGCGAGAGGGATGCTGACATCTCTCATCAATCTCAGgacaaacaaagtaataaacCAGGGGGAAAATCAAAAGCTGCATCTGTCTTCCACTCTAATATGGACAGCACTGTGAGAGAGGAGAACTCATCCCCCGGAGCGGCTATCCCAGAGACGGGGACAGATCCCAGAGCACAGGGACCGGCCGAAGACCCCGCCTCTCTCGCAGTATGCTGGCCTGGGGCTCAGAGCTCAGAGCGGAGTCCCAGTCCAGACATAACTGAACAAAGTACAGAGCCCGTAGCTGGCCATCTGCATCCCGATGAGCCTGCTTTTACAAGGGAGCAGACCACAGGCACACTAGATGTTGCCAGCACAGGTGAAACAGCCAGGAAAGAGGTGTGTTTCAAAGAGGAGGTCGCAGAAGCAGATGTGCCAGATCTTGATGAAGACGACCTCCCCACCGAGCAAGAGACTGAGTTCCCGGAGAGCGTGCCAGCCCCAGCTATCATTAGGGAAGTGAACACTATCGATGGAGAAGTTGAGGTCATTAGTAATCACACCACCTCAGCTGCGTTCTCATTTCACAACTCCCTTTTATATGAGCTGGATTAATGCTGTTTTCGTGCAGTTATTCAGTTGTGAATATATAAGTGTTTGCATTACGATTAAATAAGAATTAATCTAACTGATACAGGATTCACAGCCATTCTGCATTTCGTGTTGGTTAATGAGTGTTTTCAAACCGTTTCTGCCTGCCTgtgttatttaacatttaaaataagcacaggaaaattaaaaagaaaaacttccAGTACATTCAGAAGCTTTTTCCCATTATAGGTATTCTCTGGACATTCCTGTAGAGctgcttaaatacatttattctgtgAATTATTTGTCGTGAGTTCCCAAGCAGCTTTACAATTTACTTTCAGATCACTACATGTTTACTTTGAAGAGCAGTCCTTGCTAATTacaggagagaggaaaaaaacattcccaGCCTGCATTCAAGGACAGCTGCTCTTACAGGATTTACAAGCCTAACTGTGATATTggtagcaaaataaaaaccaaagcaaaat

Function

GO: NA

KEGG:

id description
K19751 DNAAF2, KTU, PF13; dynein assembly factor 2, axonemal

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000367 True 2933 mRNA 0.49 2 12943056 12948495

Neighbor

gene id symbol gene type direction distance location
AMCG00000370 NA coding upstream 690 12932611 ~ 12942366 (+)
AMCG00000369 nemf,LOC102775640 coding upstream 22925 12898142 ~ 12920131 (+)
AMCG00000368 wdr20,LOC106610634,LOC101173269 coding upstream 58731 12878438 ~ 12884325 (+)
AMCG00000376 dync1h1 coding upstream 118098 12790380 ~ 12824958 (+)
AMCG00000377 NA coding upstream 158820 12764272 ~ 12784236 (+)
AMCG00000384 mamdc1,mdga2 coding downstream 378897 13327392 ~ 13338022 (+)
AMCG00000385 NA coding downstream 403837 13352332 ~ 13409859 (+)
AMCG00000386 NA coding downstream 660258 13608753 ~ 13617625 (+)
AMCG00000387 NA coding downstream 669993 13618488 ~ 13626756 (+)
AMCG00000388 NA coding downstream 719394 13667889 ~ 13679929 (+)
G149869 LOC105909576,LOC107704376 non-coding upstream 101383 12833539 ~ 12841673 (+)
G149747 NA non-coding upstream 844684 12092387 ~ 12098372 (+)
G149739 NA non-coding upstream 915613 12027227 ~ 12027443 (+)
G149674 NA non-coding upstream 1142316 11800000 ~ 11800740 (+)
G149673 NA non-coding upstream 1143178 11799561 ~ 11799878 (+)
G150042 NA non-coding downstream 464370 13412865 ~ 13413064 (+)
G150066 LOC100846954,LOC107575789 non-coding downstream 700908 13649403 ~ 13650051 (+)
G150106 NA non-coding downstream 791281 13739776 ~ 13746116 (+)
G150303 NA non-coding downstream 1516397 14464892 ~ 14465302 (+)
G150364 NA non-coding downstream 1784737 14733232 ~ 14733440 (+)
G149859 NA other upstream 215153 12679670 ~ 12727903 (+)
AMCG00000352 NA other upstream 948030 11965555 ~ 11995026 (+)
G149525 LOC100846954,LOC107575789 other upstream 2407919 10534590 ~ 10535137 (+)
G149424 NA other upstream 2972255 9969324 ~ 9970801 (+)
AMCG00000281 cpsf2,LOC106608196 other upstream 3351968 9561557 ~ 9591088 (+)
AMCG00000381 NA other downstream 18382 12966877 ~ 13030853 (+)
G150069 NA other downstream 742344 13690839 ~ 13692589 (+)
AMCG00000412 pgf,LOC102799665,LOC102204058,LOC106593515,LOC106611025 other downstream 1184643 14133138 ~ 14153840 (+)
AMCG00000443 esrrb,LOC106611051,LOC101473368,LOC100708924 other downstream 1983283 14931778 ~ 14944400 (+)
AMCG00000514 NA other downstream 3862958 16811453 ~ 16814365 (+)

Expression


Co-expression Network