AMCG00000411


Basic Information

Item Value
gene id AMCG00000411
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 14157036 ~ 14159090 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000411
ATGAGCAGTAAAAGTAAATCAGAGAGCCGCAGGAGGCTGTCAGCGGGGCTGCGTGCCGAGATGATGAACAAGCTGAGAAGCCTGCAGCCGGGCAGAGCCAGGAACGAGTCTGAGAGAGACTCGGGTTTCTCAGATGTTAGTTCTGAGTATCTGAGTGCGGTGGATCAGACTGATTCTGAGGATGCACCAAAAACACCGGGCCAGAACCGCAGCTCCAGGCCTCAGCCGCCACAGATGGCGGTGCTGGGAGGGTCTTATCCGGGACTGTCGCCCATGATCATCATGAACAAAATCCTGCTGAAACAGtcAGGTCATGCCTCTCCTCCAGTGAAGCCATGGGGCTTCCATCAGGGGCTTGAAGTGATTCCTCCACCCCAGGTTGTGTTTCTTCAGCCCGTCATCTCGAACAGCAATGCCACCCCCCCGAAAAGTCCCCAGGACAAGAGGCGGCGATCCGAGAAGTACCTGCCCATCCTGAAATCCTACCCCAAAATAGCTCCACACCCGGGGGACGGCTCCTCGGAAAACAGTGGCTCGAGCTCCTCAGGGGTGAGCAGTGTGTCCTCTGCTCGTGAGGGCCGGGTCAGCGTGCTCCGGCACCGGCGGCACAGCAGGGACAAACGGCAGAGTCGCCCGATCTGGTCAGCCAGTCCGGCGCTGTCCAGCCTCCCCCCCACGCCAAGCTCCCAGTCCAGCCCTCGGGAGGAATCGTCTACCCTCACTGGTAGTTTGTCCACCAAGATGGAGGACACTCCTTTGAGTGGCCAGCCAGCCCAAACTAAAGTGTCCCAGGAGTCGGCCTTGTCCCTGCAATCACCCAGAATGCTGTTTCCTTCCCCTGAGTCCGAGACCGCCTCCCTGCCCTCCCAGGCATGCCCGACCCCCGACCCCTCCATGTCCGAGAGCGAGGGGGAGGGCTCCCACTGCTCCCTGTCTGACAACCGGAACAAGAGGAAGCGCTTTTGTAACACCTACAACATCCTGCACAAGTCCGGCCTCCTGGGGATCACGCTACGGACCAAGGATCTGATCCGTCAGAACCGCAAAACCcagctggagctggagcgcCTGAAAGAGCAGACCTGCCTCTTTGTGCAGGCGGTGAACAGCGGAGACCCCCAGGTCTGGACTAAGCTGCAGCTTGCCATGCTGCAAGCCAACCCCACTGCTGAAGAGAACGGAGAGAAAGTGACTCAAAAAAGGGGACTGGAGGATGAAGACGAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000411 True 1227 mRNA 0.59 3 14157036 14159090

Neighbor

gene id symbol gene type direction distance location
AMCG00000410 actr10,LOC106571574,LOC106608088 coding upstream 53139 14096501 ~ 14103897 (+)
AMCG00000406 naa30 coding upstream 110266 14037644 ~ 14046770 (+)
AMCG00000407 NA coding upstream 123153 14029182 ~ 14033883 (+)
AMCG00000392 NA coding upstream 247104 13882218 ~ 13909932 (+)
AMCG00000402 peli2,LOC105026454,LOC106594164 coding upstream 286835 13856638 ~ 13870201 (+)
AMCG00000422 tmem63c,LOC107732232,LOC106611026 coding downstream 21746 14180836 ~ 14204787 (+)
AMCG00000424 NA coding downstream 65074 14224164 ~ 14228809 (+)
AMCG00000423 NA coding downstream 76150 14235240 ~ 14245576 (+)
AMCG00000421 aldh6a1,LOC102788717,LOC107586880,LOC107664467,LOC107739234 coding downstream 102319 14261409 ~ 14282672 (+)
AMCG00000417 lin52,LOC107594798 coding downstream 126926 14286016 ~ 14288319 (+)
G150106 NA non-coding upstream 410920 13739776 ~ 13746116 (+)
G150066 LOC100846954,LOC107575789 non-coding upstream 506985 13649403 ~ 13650051 (+)
G150042 NA non-coding upstream 743972 13412865 ~ 13413064 (+)
G149869 LOC105909576,LOC107704376 non-coding upstream 1315363 12833539 ~ 12841673 (+)
G149747 NA non-coding upstream 2058664 12092387 ~ 12098372 (+)
G150303 NA non-coding downstream 305802 14464892 ~ 14465302 (+)
G150364 NA non-coding downstream 574142 14733232 ~ 14733440 (+)
G150455 NA non-coding downstream 965620 15124710 ~ 15125951 (+)
G150457 NA non-coding downstream 978616 15137706 ~ 15137923 (+)
G150458 NA non-coding downstream 995545 15154635 ~ 15155084 (+)
AMCG00000412 pgf,LOC102799665,LOC102204058,LOC106593515,LOC106611025 other upstream 3196 14133138 ~ 14153840 (+)
G150069 NA other upstream 464447 13690839 ~ 13692589 (+)
AMCG00000381 NA other upstream 1126183 12966877 ~ 13030853 (+)
G149859 NA other upstream 1429133 12679670 ~ 12727903 (+)
AMCG00000352 NA other upstream 2162010 11965555 ~ 11995026 (+)
AMCG00000443 esrrb,LOC106611051,LOC101473368,LOC100708924 other downstream 772688 14931778 ~ 14944400 (+)
AMCG00000514 NA other downstream 2652363 16811453 ~ 16814365 (+)
G150750 NA other downstream 2776903 16935993 ~ 16938282 (+)
G150811 NA other downstream 3386364 17545454 ~ 17548508 (+)
AMCG00000525 NA other downstream 3589420 17748510 ~ 17759582 (+)

Expression


Co-expression Network