AMCG00000420


Basic Information

Item Value
gene id AMCG00000420
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 14341500 ~ 14342163 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000420
ATGCACACGGGACGCAAGGTGAGCGTGTGGTGCATTGTGATGCTCAGCTGGTATCGCTTCTGCAAGGTGAAGAAGACCAACCACCGGTCTGTGTGGCTTTCCAAGCTCGAGTGTTGCATCAAGACCAACCTGCTGCTGGTGCTCCGCTGGCTGGGCTGGGCGCTGCTGTACACACCACTGCTCCTGGTCCACGAGAGCCTGTATATGGCAGCTTTCTTCATGACCCTCTTCAACATCAAGACCTTGTACTTCCTGCTCAAGCACCGTCTCTGGGTGGCACCATCGTGGTCGGCCTGGACCTGCCTAAGGAGTGCAATGCCATCGCGGTGTCCCTGGGGCCAAGTGCTGCCTACAGAAATTGCAGCCAAACCCCGAGGTCACTGTAATGTCTTTGACCTAATAGATGTGAGCGATTTGCTGGGACAGAAGGAGATTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000420 True 438 mRNA 0.55 3 14341500 14342163

Neighbor

gene id symbol gene type direction distance location
AMCG00000416 LOC106608304 coding upstream 1453 14316161 ~ 14340047 (+)
AMCG00000417 lin52,LOC107594798 coding upstream 53181 14286016 ~ 14288319 (+)
AMCG00000421 aldh6a1,LOC102788717,LOC107586880,LOC107664467,LOC107739234 coding upstream 58828 14261409 ~ 14282672 (+)
AMCG00000423 NA coding upstream 95924 14235240 ~ 14245576 (+)
AMCG00000424 NA coding upstream 112691 14224164 ~ 14228809 (+)
AMCG00000419 NA coding downstream 13728 14355891 ~ 14357921 (+)
AMCG00000433 NA coding downstream 200094 14542257 ~ 14545457 (+)
AMCG00000431 LOC107732571 coding downstream 206499 14548662 ~ 14567052 (+)
AMCG00000432 NA coding downstream 225168 14567331 ~ 14572246 (+)
AMCG00000429 NA coding downstream 230561 14572724 ~ 14578029 (+)
G150106 NA non-coding upstream 595384 13739776 ~ 13746116 (+)
G150066 LOC100846954,LOC107575789 non-coding upstream 691449 13649403 ~ 13650051 (+)
G150042 NA non-coding upstream 928436 13412865 ~ 13413064 (+)
G149869 LOC105909576,LOC107704376 non-coding upstream 1499827 12833539 ~ 12841673 (+)
G149747 NA non-coding upstream 2243128 12092387 ~ 12098372 (+)
G150303 NA non-coding downstream 122729 14464892 ~ 14465302 (+)
G150364 NA non-coding downstream 391069 14733232 ~ 14733440 (+)
G150455 NA non-coding downstream 782547 15124710 ~ 15125951 (+)
G150457 NA non-coding downstream 795543 15137706 ~ 15137923 (+)
G150458 NA non-coding downstream 812472 15154635 ~ 15155084 (+)
AMCG00000412 pgf,LOC102799665,LOC102204058,LOC106593515,LOC106611025 other upstream 187660 14133138 ~ 14153840 (+)
G150069 NA other upstream 648911 13690839 ~ 13692589 (+)
AMCG00000381 NA other upstream 1310647 12966877 ~ 13030853 (+)
G149859 NA other upstream 1613597 12679670 ~ 12727903 (+)
AMCG00000352 NA other upstream 2346474 11965555 ~ 11995026 (+)
AMCG00000443 esrrb,LOC106611051,LOC101473368,LOC100708924 other downstream 589615 14931778 ~ 14944400 (+)
AMCG00000514 NA other downstream 2469290 16811453 ~ 16814365 (+)
G150750 NA other downstream 2593830 16935993 ~ 16938282 (+)
G150811 NA other downstream 3203291 17545454 ~ 17548508 (+)
AMCG00000525 NA other downstream 3406347 17748510 ~ 17759582 (+)

Expression


Co-expression Network