AMCG00000429


Basic Information

Item Value
gene id AMCG00000429
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 14572724 ~ 14578029 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000429
ATGTCATTGCATGCTTCTGTGGGACAGTATTCAGGGCTGTCTAAACGCACACGTCACACTATTGCAGGACTCAATCTGCAGTCAAGCTCGGCCTTCCAAGACTTGCGCAACATCGTCAAATTCCGGCCACGCTCGGCTTTTCCCGGAAGTCTCTTCTCCCCCCCAGCTGTGGATGCCGGAGCTCCGCGCAGCGCCTGCCCGCGTCCAGATCCGCGTTGGTACCGTCGTGTCCGGGCCGGCTTCCGTACAGGGGCTCGTGTGGGTCGAACCAGAACCGGAGTAAGAGCGATGGAGAACCTGGAAACGAGTTCAGAACTGCAGTCGAGGCTGTCTGCCCTGTCCGTGTCCTCTTTCCCAGGAATAGCGTCCAAGAGCTGTGAGCGCAACGGACAGGAGAGGCTTCAAAGCACAGACCTTTCCCAGAAACCTAACAATGCCAGCCCCTGCCAGAGCGAAGACCTAAAGCACACAGGGGTTAAACAGCCCAGAGAGGGCAGCCAGGAGTCTGATGGAGATGGTTGGACTGGGGCAGCGTCTCCTCCCTCAGCACAGAGCTCCAACGGGGGGACAACGGTCCACCCTGATGACAAGGCTTCTAGCACTGTGGTGCCCCTAACTGAGAAAGctccGATGCCGCCCCTCACGCCCCCCACCACCTGGACCTCTCTGGCCATTAAGGAgctgaagatgaagatgaagcaGGAGAAGGACAGCGTGGTGACGGTGTACCGCGGCGATGTCATGACGGTGCACGTGCCCACCATCCCCGAGGGGAAGCGGGTGTGCTGGGAGTTCGCCACGGACAACTACGACATCGGCTTCGGGATTTATTTCGACTGGACGCCGGTGACCAGCAGAGCCATCACCGTGCACATCAGCGAGTCCAgcgaggacgaggacgaggaggatGAGCTGGAAGGTCCTGTCACTCCGGGGGACGTGGAAAAGGGGTCCAAAACGTCATCGACCTCCCACCTGGGAGAGATTCTGCCGGTGTACCGTCAAGACAGCCACTTGGTGGTACAAGGTGGGAGTCACGAATACCCCGGGGAAGGGACGTACTTACTGAAGTTCGACAACTCCTACTCCCTGTGGAGGAATAAAACTCTGTACTACAGGGTGTATTACAGTGCCTGAGGGCCCGcaaacagaccaaagatggatgTTTGGACAGAAAGACTttgacatttctattttttatttgtttaaaaatataattatagtgTTTATGAATAAAGATCGTCTAGGAATAgtttctattttgtttaaattgaccACCTTCTTGTGATAGTTTAGTGTTGTACGTGAAGGGCAAAACATGTAACGCTGGAGGTGTATTAATTTTCCTTGGAAGTGACTTTTTTAAACTGAAGAGTTCAGgtatttcaaagagtttttattataagagtttaaatttaaattgggTTCCGAAGACGCAAGAATCCAGTGTTtggctgttgtgtgtgttctgtgtaaTGAATAAGAGATGTTCAATATCCGTGTTTATGTATTAAGAATCATTATAACATGGCTTTGGTGTTGGTCGGGGTACTTCACACTTCTAtaggaaatgcatttcaagtttGCAAGCTAGACCTAAAGCCAGTACGAGGTTTTTGAAGCGCAAGGTCTGGAGTCCGGCGTCACAGTAGTAATGATGTTCCACTTTCCACTCGCTGTGTTCTGTAGTTGTCTTAGCCAGCTCTGAAGTCATCTGTTACTGTCTGCTTTATTGAGTTAGGTTATTGATGAGTTTGAACACAAAACCCCCAGTAGAAATCAAACCTTTGCTCAGGAGGCAGACGCGTTGCCTGATTCCTTTGAATGATGTGAGATGCTTCAGGACACATTCACAAACCGTCTGCTCCAGTGctgatgttaaaatggcaggaaaaagaaaactgatgaTCATGTGCCTGCCGTATTTTTTCCAATCTTGCTATTGAGTTATCTTTAGGACCGTAAAGCACACGTCCAAACGTCAGCTCAGCCACCTCAGGGGATGAATTGTGAGCTCGCTTTGAGACAGCACATTTATTATACTTTCTGCTCAATTCTGACTATCTGCCATTTACAGACATATATCTAAAACATAGAACAGTATAGAATCCAGCCATAGGAACACAATTGGTCTGTAAAAAACATATGATATGAGATGGATGCATTTCAGATTAACTATATTCTTGACATTAAAaacctttttcttatttttatgtaagACTATTGTTTGCACAAAGATTCAATATTTACTTTACCCCTGTTCTGGTATAAATTGTGGGGTTGTTTTCCAGTTTGCCAAGACATTTAAAGGCACTATCTAACGTTATATTTGGTGTAATGTAGGTTTGACTATTTTTACAAATTGTATAGAATGTCTTACTTTGTACGAAGTAATCTTTCTGTCTATTCAAAGTTCATACTTAAGGTTCTCTTCAGGTACTCTTGATATATATGAAGGACAAATATGAACTTCCATATTTGTCTCAAAGTTGTTGTGACTGATTAAGGCCAGTATGGATTTTACCTGAGATCACAAACAAATGTGGAATAGTAACATCAATATTGAGATGCATCGCCTTCTCATCTCAGTAGAAAGCTGTTTTTTGGCATGGTCAGCCCCACATATAGTGtatgttgctgttgtttaatttaattgcctttcacaatctttttctttttccccaaaGACTTCATATGTGTTATGCTGCTATATACAAAGCAAAACTTTGGTTCGTATTCATTGAACTGTAAACCTCTTCTTTACTGGGTCACATGCTTTTCttgaaaaatctaaataaagacAATCTCTTTTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000429 True 2815 mRNA 0.45 6 14572724 14578029

Neighbor

gene id symbol gene type direction distance location
AMCG00000432 NA coding upstream 478 14567331 ~ 14572246 (+)
AMCG00000431 LOC107732571 coding upstream 5672 14548662 ~ 14567052 (+)
AMCG00000433 NA coding upstream 27267 14542257 ~ 14545457 (+)
AMCG00000419 NA coding upstream 214803 14355891 ~ 14357921 (+)
AMCG00000420 NA coding upstream 230561 14341500 ~ 14342163 (+)
AMCG00000430 NA coding downstream 2157 14580186 ~ 14585957 (+)
AMCG00000439 NA coding downstream 12771 14590800 ~ 14597614 (+)
AMCG00000437 fcf1,LOC106589732 coding downstream 174224 14752253 ~ 14755925 (+)
AMCG00000449 NA coding downstream 179105 14757134 ~ 14779964 (+)
AMCG00000447 dlst,LOC107092408,LOC105916992 coding downstream 221696 14799725 ~ 14809276 (+)
G150303 NA non-coding upstream 107422 14464892 ~ 14465302 (+)
G150106 NA non-coding upstream 826608 13739776 ~ 13746116 (+)
G150066 LOC100846954,LOC107575789 non-coding upstream 922673 13649403 ~ 13650051 (+)
G150042 NA non-coding upstream 1159660 13412865 ~ 13413064 (+)
G149869 LOC105909576,LOC107704376 non-coding upstream 1731051 12833539 ~ 12841673 (+)
G150364 NA non-coding downstream 155203 14733232 ~ 14733440 (+)
G150455 NA non-coding downstream 546681 15124710 ~ 15125951 (+)
G150457 NA non-coding downstream 559677 15137706 ~ 15137923 (+)
G150458 NA non-coding downstream 576606 15154635 ~ 15155084 (+)
G150459 NA non-coding downstream 581579 15159608 ~ 15160123 (+)
AMCG00000412 pgf,LOC102799665,LOC102204058,LOC106593515,LOC106611025 other upstream 418884 14133138 ~ 14153840 (+)
G150069 NA other upstream 880135 13690839 ~ 13692589 (+)
AMCG00000381 NA other upstream 1541871 12966877 ~ 13030853 (+)
G149859 NA other upstream 1844821 12679670 ~ 12727903 (+)
AMCG00000352 NA other upstream 2577698 11965555 ~ 11995026 (+)
AMCG00000443 esrrb,LOC106611051,LOC101473368,LOC100708924 other downstream 353749 14931778 ~ 14944400 (+)
AMCG00000514 NA other downstream 2233424 16811453 ~ 16814365 (+)
G150750 NA other downstream 2357964 16935993 ~ 16938282 (+)
G150811 NA other downstream 2967425 17545454 ~ 17548508 (+)
AMCG00000525 NA other downstream 3170481 17748510 ~ 17759582 (+)

Expression


Co-expression Network