AMCG00000430


Basic Information

Item Value
gene id AMCG00000430
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 14580186 ~ 14585957 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000430
gtttttaataaaaggttTACAGGCCCGGCGCTTACGATATAACATATGAAGTTGGGGACAATAAATGAAATGGGGAAGGTTTCTTTTTACACAATGTGGTCCCTACGAGACGCCCCCCGACAGTTGACCAGTGAACCCAACCGCCTGTGCTACCGGGCGCAGGTACCTCTGCCATTGCCGGAGCAGCTGGTCGTGTTCAGCCTGGGCGACTGGAGGTCCTATTCCAGCGACACGGTCATCATGGTGGACGTGCTGGTGGGTCCAGATGTGAAGTGCCAACATCTCGGAACTCTTTCCTCTCAAAGAAGGTGCCTGGTTTGGGAGGGAGACTGGCGGTCGGACCTCCTCTCAGCGGCCGTGGAGAGGGCTGAACTAGGGCTGTTTGGGAAGATTGTGCTCACTCCTGCGGTGGTGTGTCAGGTTAAAGCCGGCTTTACAAGCAGCACTCCGGTGTCATCACGGAAACGCACGCGGTCGGATTGGCAGTCTGGCACGCAGCAGGTGGAGACCTTCCCTGGCCAGCTCTGTGGAGGAGGCAAGCAGCTGGTGAGGACACCTGACCACCCAGGCTGGGAGAAGAGCAGAAGCCACAGCACGAGCTCCGTAGAGCTGAGCGGCACGTACAACTTAACCAGAGACTATACTCCACACAAAAAGCCACGTCTGATGCCAGTGGAGAAATGCACAGCCTTGGAGAAGAGGAGGTTCCTGATCTTGAGTTCGGGAGACCTCGGCAGGTCCCACAATTCCACTCGGGACTTGGGGAAGAACTGTGGTTTGTTGTCAGGGTTGAAAACCAGGACGAGGAACATGGGCAGAGCAGTGCGTCCCAGGCCACGCTGGTGTCATGCCATGTGCCTCAGTGACCCCGAGACTGCAGTCATGATTGGAGGAGAGGCAACAGAGCAGACGCACTGCACGGACTCCCTCTGGAAGCTCGAGATTGATGATGACTTCTGGTTTCCCATGGATTGCTCCAGCTCGGGCCCCATCCCACTCTGCTCTCGGGGTCACTCTGCCACCTACGACCCCGAGTCCAAGACCGTGTACGTCTATGGTGGCATGAAAGACGGCCGGCGCTACAGTGACATCTACATCCTGAACACTTTGACATGGAAATGGTCACACGTGGCTGCAAGAGGCCTCGTCCCCACCCTGGCTTACCACACTGCAACCATCTATAAGAAGGAGCTGCTGGTGTTTGGTGGCGTCTGCCCCAGCCGCACCCCTGAAGGCAAGGCCTGCAGCAATGCGCTGTTCATCTTCAACCCGGAGTACGAGCTGTGGTACCAGCCCATCGTGGAGGGAGACAAGCCCCAGCCCAGATTCGGGCACTCTGCCACCCTGTTGATGAACAAACTGCTTATTTTTGGTGGGAAAAAGACTCCGACCTATCTGAATGACCTCTGTATAATGGATCTGgGGTACATGGAGTATTCGGCTGTGAAGTACGCGAACACGCCTCCACTGCCGCGGGGTTTCCACGCTGCTGTACCGGTCTCTGATAAGAAAATGCTGATAAGTGGTGGCTGTAGTGCCATTGGGGCCCTCCAggacattttcttctttaatcTGGAAAGCAGCTCGTGGAGTGAGCTGTTGTGCCCGGCGCTGTGTGCGAAGCCCCGAGCAGGCCACAGCATGATCAACCTGGTGTGTCCGCGCCTCACCGACACCGACAAACAGAAGCAGGCTGACACCAGTGTCTGCACCATTCTGATATTCGGTGGCTCGGACTGCACCGGCACCTTCTACAACGACACGGTCCGATCCACCGTGGAGACCGGAGAGGGCAGAACAAAGCGGCTATGATAGGGGCAAGTGTATATCGTCAGTAGTGCAGCATTAAACTAGTGTGTTTaagcatatatttttaaactgaggggagggagaggggctgTTATGGGAGAGTCTACCTATTATTCTTAGACTAGGAGTTTTGAGGTTGTAAGTCCAATTAGTATTGATACCTTGGAGAAGAGAGCACTTAAGAATTAATACACGGGATAATTAGCAATAAATGGTATGttagcttttttatatatataatatatattttccttactcctcatatatatatatatttttttttatttttgtggttgaTACTGAATGGGTTCCAAGCACTCAATATTGTCGCTTCCCTGTAAAGTAATTTTCATCTCGCTTGTCTTGTAGTGGGGATCCCAAGTGAAATTCATAACCTTAATATGAGGTTTCCGCTAATTATTGCTTCCTATGAATCCGaattcaaaaacatttctggAAATGTGCATATTTAGTGTCCAATCATTAATGCATTGGCTACTAATTTTATCTACTTGCACCTTTTAAATcactttgaatgttttgtttgtttttagtacaATGAATGAGAACCATTAAATTAATGACTTTTGTAGCCTTGATAGTATTAGATGTACTTCATGTTAAGCAATTAAGTACATAACTagttatgaattcacatacatGAAGTAGGCATACACTTTGTATAATATTGGACATATGAATACTACATTTTAATGCTCATTAACTACCAGTGGGTTCGATCAGTCTTTAAAGACACAATGCATCCGTGACGGAACAGACCAACTAATTACAagataaaaattgaaatgtcatGTGATTAAAGATACTTAGACCTCAAAAGGTCTGCTGCCTTCCACTGAGAATGGACAAGCTTATTGTGTGTGCTAGAGAGGTTACAGCTCCCCCTGAGCCTGAAGTACACCATGACAATTAACAAGACTTGTCAATGGATTTGTTTTAGCcatcaacactttttttttttttgtataataaatcGTGTTTTGACGTTACATCGTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000430 True 2827 mRNA 0.48 13 14580186 14585957

Neighbor

gene id symbol gene type direction distance location
AMCG00000429 NA coding upstream 2157 14572724 ~ 14578029 (+)
AMCG00000432 NA coding upstream 7940 14567331 ~ 14572246 (+)
AMCG00000431 LOC107732571 coding upstream 13134 14548662 ~ 14567052 (+)
AMCG00000433 NA coding upstream 34729 14542257 ~ 14545457 (+)
AMCG00000419 NA coding upstream 222265 14355891 ~ 14357921 (+)
AMCG00000439 NA coding downstream 4843 14590800 ~ 14597614 (+)
AMCG00000437 fcf1,LOC106589732 coding downstream 166296 14752253 ~ 14755925 (+)
AMCG00000449 NA coding downstream 171177 14757134 ~ 14779964 (+)
AMCG00000447 dlst,LOC107092408,LOC105916992 coding downstream 213768 14799725 ~ 14809276 (+)
AMCG00000448 NA coding downstream 286475 14872432 ~ 14879117 (+)
G150303 NA non-coding upstream 114884 14464892 ~ 14465302 (+)
G150106 NA non-coding upstream 834070 13739776 ~ 13746116 (+)
G150066 LOC100846954,LOC107575789 non-coding upstream 930135 13649403 ~ 13650051 (+)
G150042 NA non-coding upstream 1167122 13412865 ~ 13413064 (+)
G149869 LOC105909576,LOC107704376 non-coding upstream 1738513 12833539 ~ 12841673 (+)
G150364 NA non-coding downstream 147275 14733232 ~ 14733440 (+)
G150455 NA non-coding downstream 538753 15124710 ~ 15125951 (+)
G150457 NA non-coding downstream 551749 15137706 ~ 15137923 (+)
G150458 NA non-coding downstream 568678 15154635 ~ 15155084 (+)
G150459 NA non-coding downstream 573651 15159608 ~ 15160123 (+)
AMCG00000412 pgf,LOC102799665,LOC102204058,LOC106593515,LOC106611025 other upstream 426346 14133138 ~ 14153840 (+)
G150069 NA other upstream 887597 13690839 ~ 13692589 (+)
AMCG00000381 NA other upstream 1549333 12966877 ~ 13030853 (+)
G149859 NA other upstream 1852283 12679670 ~ 12727903 (+)
AMCG00000352 NA other upstream 2585160 11965555 ~ 11995026 (+)
AMCG00000443 esrrb,LOC106611051,LOC101473368,LOC100708924 other downstream 345821 14931778 ~ 14944400 (+)
AMCG00000514 NA other downstream 2225496 16811453 ~ 16814365 (+)
G150750 NA other downstream 2350036 16935993 ~ 16938282 (+)
G150811 NA other downstream 2959497 17545454 ~ 17548508 (+)
AMCG00000525 NA other downstream 3162553 17748510 ~ 17759582 (+)

Expression


Co-expression Network