AMCG00000449


Basic Information

Item Value
gene id AMCG00000449
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 14757134 ~ 14779964 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000449
ATGTACCCCTCTTGGGGGAAGTATGGCGGTGGTCATCAACATCCGCCGCCTCCTCCACAGCACTACGGAGTGAAACCGCCGCCTGTGAGGGGTCCCCCACCGCCGGGACCAGGGTATGGGGGATATGCGCCACCTGCGAGCTATCCTGCGGCCCCTGCACCCGGTCCGGCCTCGTCCAACTTCTCGAGTCTGCGGGAGCAACATCTGCAGCAAATGCAGCAATTGCAGCAACTCCATCAAAAGCAGCTCCAGTCTGTCCTGCATCACAACAATAGTCCTTACAGCGGTGGCTCTGCCCCGGGAGCCTGGCAAAGTGGTGGCACCGGGTTTCCCGCCCCGGCTCCGGGACCGGGACCTTCCGCTCCAGCCCCTTACCAACAGCCGCAGCACCAGAGGGTTCCGCCGATTGCACCGCCTGAGCAGCCTCACCACACGCCGCCGCTGCCAGTGCCAGCTCCGCAGCACCCGACCACTGAACCCAGTCCTCCGGCGCCGGGTCCCAACGGCGCTTCCCAGCAGGCCAACACACGGGAAAACTCATCGGAAAATCCGGACAGCGGTGCTGCCAAACCTGCGGAGGAGAAAACAGATGTGTCTTCCATGACATTGCAGgaGCAACAGCAGTATTGGTACAAGCAGCACCTCCAGAGCctacaaaaattgaaaaatgataAGGCTaaagaaaagcttcagaaagAAGCTCGCCCACCTGTCAACAATCAGACCACAAGTGCCCCCCCTCCACCAGTAGAGCCCCCCAAGAATGAacccccacctccaccacccAAAGAAGagccccctcctccacccccacccgACGACTCTAAGTCGGCACTGATTGCTTCCGTGAAACTGAATGTCAAGAACTACCATGACTCTTGTATTTTCCTTCCACCCCAGACGATGCCGGTGGACATGCAGCTCAGACACTACGAGATGCAGCAACAGCAGTTTGCTCCTCTGTACCAGGAGTGGGATCGGCAGTTTAAACTGTGGCAGGAGCAGTTCCAGGGTTACCCCCATAAGGATCAGCTACAGGATTATGAATGTCAGTGGAAGCAGTGGCAGGAACAGATGAAATCTACTTCGGCACACCTGCAGGAAAGGGTCACGACCCTTCGCACCATGCAGCACCAGTATGCCGCCACATCTTACGTAGGTGGCATGATGGGGATGCCACCGTATGGGCAGTACCACCATCCCGTGTCGGACGCACAGATGCCACCACCTACATCAGTAGCCTCTGCTACACTACTCTCTTCAGACAAGGAATCCCCATCTGCCTCAGCTCCACTGCCACAGGGCCCCCCTCCGCAGGGCCCCCCTCCGCAGGGCCCCCCTCCGCAGGGTCCTCCGCCACTGGGTCCCCCGCCCCAGGGCCCCCCTCCGAAGGGTCCCCCGCCGCATGGCCCCGTGGCACATGGTCCCCCACCGCATGGCCCCCCACCGCATGGCCCCCCGCTGCATGGCCCCCCGCCACAGGGCCACCCACTGCGGGGCCCCCCACCACAAGGCCACCCACCGCGGGGCCCCCCGCCACAGAGCCACCCACCGCATGGCCCTCCGCCACAGAGCCACCCACCGCAGGGCCACCCACCGCGTGGCCCCCCACCACAGAGCCACCCACCAAAGGGTCCCCTCCCGCAGGGCCCTCCACCACCGGGCCCCCAGCCACAGAGCCACCGACCGCAGGGCCCCCCGCCACAGGGTACCCCACCTCAGGGTCCCCCACCCACAGGGCCTCTTTTATCAGGGCAGCAGGGTGCACAGGGCCATTCAGCCCCACACTATGTACCTCCCTCAACAACGTCAACTGCAGAAGCCCCACCTCCCTCTGCCTCAGCCTCAGGGAAATCGATGCCTCCTGCTGCAGGTGCTTCATCAGCGGTTTACACCTCCAGTGGTCCAGCTGTTTCAGGAGGGAGGCCGTCTGCACTGTTGCCAACTCCCAGCCCAGCACCCAGTTTTGAAGGCCCAAGAGGGCCAAGGTTTGATGGTCCCAGGGGGCGTGGTGCTCCTAGGTTTGAGCATCATCATCAGCAGAGGTTTAATGCACCACCCCGATTCGAACCTCCTCCCAGAGCTGAACAACCAATGAGATTTGATCAACCACCTAGAGCCAACCAAACATCGCGTTTTGGAGCACCATCAAGATTTGAGCCACCTCCTAGGCCAAACCCCCCATCTCGTTTTGAACGCCCCCCTGCGCCTCAACAGCCACCTGGGTTTGCTCCACCATCCAAACCTGAGCCTTCTAAAGCCCAAGAAGATAAATCACTGGAGAGTCAAAGTGGGACCTCGTCTAACAACAAGGGCTCCAAACCTGAAGACCCACATGAACTACCTAAACCTGCAACTCAAAATCAAGCTCCTGCTCAAGACTCCTCTCTTAAGGAAACTGTAACGGATGATTTCTTGGAATCAGAGTGTGGATTCTTTGTCCCAAGTGATCCCATACCTCAGACTACTTTGAATAGGCCAGGGCCAGTAAATAAACCTAGTAAACCTAGCGGAGAGGTTGCTAACAAACCACAGCCTTCAGAAACATCCAAGGTACCTATGTTAGAGACTTCTGCTGAGCCACAGAAACAATCTGCCACCCATAAAAACTCCTTTAATCAGGGTGAAGAAAAACTCAAGAATGATATAAACACTGGTCCTCAAACACAAGAGAAACTTCCTGAACAGATTCCCCCCAAAACTGAACCCTCTAACCCAACTCATGGTTTCTCTCCCAGGGACAACCAGAAAGTACATGCTCCTATGGGGCGAGGAAGGGGACAGGAGAGAGGCCGGGGACGTGGGCGAGGTCATCCTGGAGCACCTGGTGGACCAAAAGCTTTTGGTCCCAATTCCAGTGTTGCATCCAATCTACGCACAGAGAGTATTGAGCCCAAGCCATATGATTATAGGCCGCCTTTCCAGGAGGGCAGCATAGAAATGAACCAAGAGGAGGAGGGCTATGATTGGCAGGATCCATCTATAGATAGGCGGGCGGGGCTTGATGGCAGACTGCCACCTCCCCAAGGTGAGCGGTggggcagagaggaggaggagcattACCAAAAAGATTATTATGAAGATTGTGGAAGACCAGACCATCCTTTAGACAGAGACACCCTGGAGGGTCCTGGTAGAGAGAGACACTGGGAGGAGCCAGGACCTGACTACTGGGAAGAGGGTGATCCCTACTGGAGGGAAGAGAGGCCACCATTCCGACACACACCCCCATTTCCCCATGATGCAATGGATAGGCCACCCAGGCGCCTCCCTCCTCCTCATGAGTACATGCACCGTGGTCCGAGGCGCCCCCCTCTACCTCACGAGATCATAGAACGGGATCTTAGGGGACCCCCTCTGCATCATGATGTCATGGAACGGGATCCCAGGGGGCCTCCTGTGTACCCTGATGTCATAGAAAGGGAACCCAGACGCCCTCCTCCGCCTCGTGAAGTCATAGACAGGGATCCCAGGGGACCTCCTTTCCATCATGAGGTCATGGATCGAGACCCCAGATGGCCTCCAGTGCCACATGATGTTTTAGACCGGGAACCGAGGCGTGCTCCTGTGCCTCGTGAGATAATGGACAGAGACTCCAGACGACCTCCTTTGCCTCATGAAATGATGGAAAGGGATTCTCGTCGCCCGCCCCCACCTCCTCACGAGCCCATGGAGAGAGACATTGCACGTGGGCCATATTTCAGGGAGTATGACCAAGAGTTTGTCCCAGACGTGGAAAAATATGGAAGACCTCACCCAGATTACCACAGCCGGGATTATGAACGAGAACCGGATTATCATCGCCCAAGGAATGAGTGGGGAGCAGGGGATCATGGCTGGGAGCCTCCATACCCTCCCCGAGCACCACCTGATCGCTTCAGGGACGACCGATGGCCTGAGGAAAGAGATCAGGACTATTTGTACGAGCGGGGTGTACAGGAAAGGGGGGAGCTGCGTGTCCGTGAGTACCCAGAGGAGCCCCCTTACAGGAGGGAAGAGCAGGAATACCCACCAGAGTGGGAAAGGGAGCCTCTATCTGAGAGAACATTCGTGCCAGAGATCGATGACCGGAGACCTCCGTTTGAAGCTCCTGTGGAGCTACAACCTCCTGCTTCGCATGGTAATCCCCCAGAAACTCAGATGGATGAtggaactggaactggaaaGGGCATTCTGGCTCTTTCTCAAAGACAACATGAAATTATTCTTAAAGCTGCTCAGGAACTCAAGATGATAAGGGAACTCCAGGAAAAGAAACATGCTCTGAATGAGCTTTTCAAACCAGAAAATGAGCCAGTGGTGCAGTCAGAGGTAATGGCAACAGGGATACTTGGATTGGAGATCCCCCCTGCAGTGGCTGATGCCTTACAGgCGACTAACCTGCTGCCCGATGCTGGCCTGACGTCTGCAGGTACAGtggcaggtgcagggcatgcttggGGTAATGAGAATCTACACCGTGTTTGGGACACTGGAAGTACCACACAAGGCATGGAGCCAAACTTTAGGATGTCACAGGCTGCTATTCCAGAGGTCACACCACTGGCGACTCCTACACTCGTCAAACCTACTCTCATTCCCAAAACTGTGGATTATGGGCATGGGCATGATGCTGGATCTAAGGTTGAGCAGATCTCTTATGGTGAAAGGATCATCCTAAGACCAGATCCGGTGCCCACAGAGAGGGCTTATGAGAAAGAACCAATTCCCAGGGATCACTATGAGAGAGACCTGTATTATGAGAGACGCGGTGACCCGTATTTGGAGCGGCGGGAGTACggcagagagcgagagagggaccGCGAGAGAGAGCTGTACCGTGAAAAGCCTCCTCTGGATTACGAGAGGGAACGGTATGAGAGGGAGCGCTATCCCAGGGATGAAAGGCTCCCCCCAGGCCCACCTCCTCGTTCAAGCAGCTACAGAGACCGGGACAGAGAGGGAAGGgacagcagagacagagagcgcGAGGGCCGAGGCAGCAGAGACAAGGACATGAAAGAGCACTTCAGCAGGCCCGGGTACGAGAGGCCACCGTACGAGCGCGGGTCTGATCGCCCACCTTACGATCACCCCTCTCCCGCTTATGGAAaTGACAGGAGGAATTATCCTGAAGAGAGGCTCCCTGTTCCAGCCCAGCCtttacccccccaccctccgGCCCAACCACGAGTTGAAAAGAAACCCGACACGAAAAACGTGGACGACATCCTTAAACCCCCAGGCAGAGAGAGCCGCCCCGAGAGGatcGTCATCATTATGAGAGGACTGCCAGGGAGTGGGAAAACCCACGTAGCAAAACTCATTCGGgacAAGGAGGTTGAATTTGGAGGAGCACCCCCCAGAGTTCTTGGGCTGGATGATTATTTTATGACTGAGGTAGAAAAGGTTGAGAAGGATCCAGACACAGGAAAACGCGTTAAAAGAAAGGTTTTGGAGTACGAATACGAGCCCGAGATGGAAGACACGTATCGCAACAGCATGCTTAAAACCTTTCGCAAGACCCTGGACGACGGCTTCTTCCCCTTCATTATCATCGATGCCATTAACGATCGGGTCAAATACTTTGATCAGTTCTGGAGTGCAGCCAAGACTAAAGGTTTTGAGGTCTACTTAGCTGAAATCTCTGCAGATAACCAGATATGTGCAAAACGGAACATCCACGGCCGAAAAGTGAAGGACATTTCAAAGATAGCCTGTAACTGGGAGTCCGCCCCTCGCCACATGGTGCGACTGGATATCCGGTCCTTACTGCAGGATGCTGCCATTGAAGAGGTTGAGATGGAGGATTTTGACCCAACAGCAGAAGAGCCAAAAGTAGAACCGAAGAGAGAGACCgtggaggaggaagaaggagaTCTGGGTTACATTCCAAAAAGCAAATGGGAGATGGACACCTCTGAGGCAAAGCTTGACAAGCTGGATGGGCTGAGGAGCAGTTCGAAGAGGAAGCGGGACTGGGAGAGCGCGGCAGGCATGGAAGACTACCTACAGCTTCCAGACGACTACGCCACCCGCATGTCGGAGCCAGGGAAGAAAAGGGTGAGGTGGGCGGATCTTGAAGAGAAAAAAGATGCAGACAGGAAGCGAGCTATTGGGTTTGTCGTCGGACAGACAGATTGGGAGAAAATCACGGATGAAAGCGGACAACTTGCTCAGAGAGCACTCAATCgTTGGCTGGCTGTGAAGAACAGACCCAAAATCTTGAATGTGAAGTGGTCCTGAAATCTGTATCTGTACACTTTGAGTCCCTGGATACTCCTACAGCGATTCTTCACttgaaacacaaaattaagACAATAGTGGATCGTTTTGTTAGGCTCAAGGTAGAATCACGGTCCATTGCAGAACTCCTTTCGGTACCATGAAATTGTTAGTGTTTCCGTTTTTTTatactttgtatgtattttatgtaacctgtgagcactgttgcttattttaccatttaaaaaagaaaaaaacaataaaaaaatacacaaaaaaatagaattcTCATGTGGCTCATGTGAATAATCATATGAGCCTCAAAATTATgtatggtcttttttttttctgctacgTAACATCTTCCAGTACAAAATACAGCTTTTCATGACCAATGAGCACATGGGAAGCACATGTGTGTAATATCCTTCTTTTCAGTGTGCCGCTCATGTATGTTTCTCATCTGTGCTGTAAgaattcttttttaaatttgctttcAGTAAACAGTTGCAATTGGAAGGTGCTGTTTAAGATGGTAGTCTGCATCAGACACTGACAATAGAGACTGAATACAATGCTTCTACATCAGGGAATGGagcattattaaattacatgcGCCCCAAATTACTGCTGTAAATCAAGagctttattttataatctaTATTGTCCTGTttcagtaaatacaaaaatcattgACATGTCAAAgctaaaatgaaatgaattcaTGTTCTTCAACCTTAATCCCATTCATCGAATAAACAACAGCAAGTCATGCTCCTGAGGAATGTTTTCAGACTTGAAATGGGAGTGCTTGATTTACTTAAATTCTTTGTTTTACggatattcaaaataaattattgaaagaTTAAAATTTGAAACCATGCAATTTTAGCATTTCCTGTATCCGATTTATGGCGTAGtaaaaatgcactgatttgcaCTCTGCCGTCTGCCATATTGTACTGGACTGAAAACCAGCAATAGCGTTCAATGCCACGAACCACAAAAAAGCATCAACTCCCTAACGTCTCCTTATTAcgattttctgttacaaaatcAATACGTGAGGATTTTATGAGGATCTtggatttaaaatatcaatttgcTGTCTGCTACTTGTATTAAccttctttcttccttttcccTTTATCCAGCATGGTTAACTTGTTTTTCGACTGCAGTTGTACTTGTGGTTTTGTGTAAACTCAGTATTGAATACGCTTTGAGCTGAtgggagggggtggaggggtgaAAGGAAGAGATTTGTGGAATTTTGCATTGGAAGCATAATTCTGTAATGAGATCATACGGTTACTCATTTGGTTAGAGTGcattgtttctcttttaagaaattgcttttgtatttgGTAACTGTTTCTTCCACTGTCTAGAAATGGGCTTAAAACCGTTACTTTCAAGTAGATTAGTGTTGCTAGAATGAAATATGTTAAGTCTGAGagacttcattattttatttttatttattttttattagtggCAGCTTTCAGTCTTAAAGTGGTAAGTTACAGGAATAGGTCCACATGGCTTATCATGTGGCTTGTACTGTAGGGCTCGAGCCACGggattttattgaaatatcaCTAGAGCAGGTCGCGTGGATCAAgtactggggtggggggtgccaGCAAAAACGCCAGCACACCTGGGACTGTGACCAGCATTTGCATTGTATACAGTAGCGTGCGTTGATTTATGTACGATAATTATCTTTGTCTGTACATacattaaacagtttttttctcaATCTTAATTTCACTaatctttttaattgaaaagagTTCATGATGTGCATGATGTCAAGGATTGTGGAGTTGGATGGTTTGCATTTATAACATTTGCACATTACCAAAGGAATTGCCATCAtagctttatatttattatcgATGGTGAGAAAATGACTGTCTTCTACGTATGTCTAACTGTGAATTGTGTTAAATGCTATAAAAGAACAAgtacatctatttt

Function

GO: NA

KEGG:

id description
K17602 YLPM1; YLP motif-containing protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000449 True 8190 mRNA 0.51 20 14757134 14779964

Neighbor

gene id symbol gene type direction distance location
AMCG00000437 fcf1,LOC106589732 coding upstream 1209 14752253 ~ 14755925 (+)
AMCG00000439 NA coding upstream 159520 14590800 ~ 14597614 (+)
AMCG00000430 NA coding upstream 171177 14580186 ~ 14585957 (+)
AMCG00000429 NA coding upstream 179105 14572724 ~ 14578029 (+)
AMCG00000432 NA coding upstream 184888 14567331 ~ 14572246 (+)
AMCG00000447 dlst,LOC107092408,LOC105916992 coding downstream 19761 14799725 ~ 14809276 (+)
AMCG00000448 NA coding downstream 92468 14872432 ~ 14879117 (+)
AMCG00000456 tgfb3,LOC106590795 coding downstream 330881 15110845 ~ 15123601 (+)
AMCG00000461 clg15h14orf1,LOC106591002,LOC107724257,LOC104921354,LOC107554785,LOC102222511 coding downstream 405483 15185447 ~ 15187339 (+)
AMCG00000468 NA coding downstream 481127 15261091 ~ 15262791 (+)
G150364 NA non-coding upstream 23694 14733232 ~ 14733440 (+)
G150303 NA non-coding upstream 291832 14464892 ~ 14465302 (+)
G150106 NA non-coding upstream 1011018 13739776 ~ 13746116 (+)
G150066 LOC100846954,LOC107575789 non-coding upstream 1107083 13649403 ~ 13650051 (+)
G150042 NA non-coding upstream 1344070 13412865 ~ 13413064 (+)
G150455 NA non-coding downstream 344746 15124710 ~ 15125951 (+)
G150457 NA non-coding downstream 357742 15137706 ~ 15137923 (+)
G150458 NA non-coding downstream 374671 15154635 ~ 15155084 (+)
G150459 NA non-coding downstream 379644 15159608 ~ 15160123 (+)
G150460 NA non-coding downstream 380493 15160457 ~ 15160677 (+)
AMCG00000412 pgf,LOC102799665,LOC102204058,LOC106593515,LOC106611025 other upstream 603294 14133138 ~ 14153840 (+)
G150069 NA other upstream 1064545 13690839 ~ 13692589 (+)
AMCG00000381 NA other upstream 1726281 12966877 ~ 13030853 (+)
G149859 NA other upstream 2029231 12679670 ~ 12727903 (+)
AMCG00000352 NA other upstream 2762108 11965555 ~ 11995026 (+)
AMCG00000443 esrrb,LOC106611051,LOC101473368,LOC100708924 other downstream 151814 14931778 ~ 14944400 (+)
AMCG00000514 NA other downstream 2031489 16811453 ~ 16814365 (+)
G150750 NA other downstream 2156029 16935993 ~ 16938282 (+)
G150811 NA other downstream 2765490 17545454 ~ 17548508 (+)
AMCG00000525 NA other downstream 2968546 17748510 ~ 17759582 (+)

Expression


Co-expression Network