AMCG00000471


Basic Information

Item Value
gene id AMCG00000471
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 15650291 ~ 15669353 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000471
ttttttcttttttctttttggtgcCTTTTGCATTCCCTCGCTTCTCTCCGCCCGTGCGCCTGTTGGAGCGGCTGGCTACGTCACAGTGAAAACTAACTTGGCGATCACAATGTTGCACAGTTAACAGCCATCCTCTCTAGCAGGGAAGCGCTGGAGCGACGGGTCTGATCGCAGATTAAAGTCCTTCCTTTTCGCCCATGGCTCCCTGTCAGCACTAGAGCTGGTTTTAAGAGATtgccaaacaaacaacaacagcgagagggagagagagagagagagagagagagagagagagagagagagaaaagccaGACGGAAGTGGACCGATTTCACACGAGGTGTATCCTGCAACTTTTCCAAGGGCTTTATCTGGGTCCCAATGGCAGGACACGAATGGGACGACTGGTTTGAACGGGAGGAGTTAATCGGACAGATCAGCGACATCAGAGTGCAGAATCTGCAAGTACTGGGCTGGTTGGACAGAACTGAGACTTCAAAGGAAGACTTCCGTAAATGTAAACCTCCCTTGGAAgtgaacaatttatttaaagacattcAAGATGGCCGAATCTTGATGGCTCTTTTGGAGGAACTCTCGGGCTATAAATTGCTGCATGGCTTCAAACCATCTTCGCATCGAATATTTAGGCTAAACAATATAGCTAAGGTCTTGAACTTCTTGGAGGAAAGAAATGTGAAGCTGGTCAGCATTGATGCTGCCGATATTGCAGATGGGAATTCCTCCATTGTCCTTGGACTGATATGGAACATAATTCTCTTCTTTCAGATAAAAGAACTGACAGGGAACATCAAGAGCAGGTTTCCATCCTCCTCCAGTCTTTCTTCACTGCACAACAGCACTGACTCAGATACGTCCCACCCCAGCACTCCCTGTGAGGAGAAGCGTGTGTTTGTGTCGCACAAGGATCATGGCAGGGCCATAAAAACACTACTGCACTGGGTGCAGAGACGAACAAGAAAGTATGGTGTggcagttcaagactttggaaaAAGCTGGACAAGTGGCCTGGCATTCCTCGCAGTAATTAAAGCCATTGACCCCGGCTTGGTGGATATGAAGAAGGCCCTAGAGAAACCTCCAAGGGAAAACCTAGAAGATGCTTTCAGAATAGCACATTACAGCCTGGGCATACCCAGACTCCTGGAACCAGAGGATGTTACCATTAATTCACCGGATGAACAGTCAATTATGACATATGTATCTCAGTTTCTTGAACACTTTCCAGAGCTAGAGGATGAGGAGATCTCTGAGGTGGTGGAAAAATCTCTTTCTGAAGTGAGACAGAATTCTTTGCTAAATGAAGAGTCTGATCACAATGCCCATAAGAATGGGGATCGCCCATATGTTGTAAGAAATGATTGGATACAACCGCCTCCAAAGATATTTATTTCCTCTGTATCAGATGATTTGGAACAAGTGTCTCCCGTAAATGAGATGCTGAGTGATGGACATGGTCAACCTTGGAATAGCGAAGAAGATTCCTCAGAGTCCACCTCCAGCTATGTAGAGTCCCCTGGCTGTAGAAACCTACCTTTAGAACTGGGGAAGGAAGTGTCTTTCACAGTGTCCAGTTCAAGTTCTCCCCAGCCTTCCTTTGTGGACTCGGTGATTGACTCACCAGACTCTTGGAGCGAGGTTCTGGGTGAAGCTGTGCATCCAGAAAGCTTGGGCGAGTTGCACAAGAGCAGAAGTGACAGCTCTCTCAATGAAAGCGAACTGTCACTCGATCATACGGGGCAGGGGACCACGGGGGTAGAGTGGATGAAAACCATAGAAAATGTTCAGGACTCTGGTACAGAATCCGCACTTGAAGGAAATGCCACAGAAGACACCGTTTTTTCTGAGCTTTTCATAGATGAAGGGGCTTTCTCGCAAACGTCTATGGATGGCTTTCACACAAAGTCTAAGCTGCCTTCGGAGGAAGAAGATGCATACAGATATATTTTGGACCTGAAGGATGATGAAAATGCAGAGCAGGATGgttctgaacaaaataaaatgagtttGCCACAAAATGCCTGTGGAGAAACGGACCACCCATCTACTGATGTGTCCCGAGCTTCTGTCTGCAACAGTGCCCCTCCAACAGAGGTTGGTGAAGAAGGCTATCGAGAAGCAAAGAAACGAGATGGTCACACCTTCCCTGATGAGGAACTTTGCAATAGTGAACCCTGTGAAATGAATGGCAGTGTTGCAGATTCTGCTATACCTCAGGATATAGTTTACTACTCTCACTATGTGACCATATCAGATGTTGATGAATCAATGTCAGAGCCTCCCAATGACTTACCATGTGATGAAAAGTCTGATCTTAAGGAAAATACAGAGGAATACCTTGGAAATCATGTGGACACATTACAAGTGGATGCTTCCACTGATGAAAACCACTTGAACAAAGACAATCAGGGAGCCGATCGTGATTCCAGTCAATCTGAACAAGAACGTCTGTCGGGAGACTTTAATAACTCTGAAAAACAAACGGACCAAATACTATCATCCGAAGCTGACGCACTCCTACAAAACAATGAAGACTTCAGACTGTATAAGACTGCAGAGGAACAGATCCCAGATACAATGCCAGGAGCCACAGAATCTGATTTCAGCGAACAGCATGAGGACTTTCGGGACCTGGGAGATGTCAACTCTGATAACTGTGAATGTATTAGTCCTACAGAAGAATCCAGTGCCAGAAAACACGGAGAGATCCCAAGGAATTCAATACCATGCGAGTCAGCCAGGGAGAGTCACCTTCCTCACGTTTTATACCTTAGGAAACTTAATGATACAGATGACTTAAAGaataAAAGCAGCGAGACCAAAGAAGGCGGGAATGAAAGGAATCAGACTATCAGCTGTGTTACCAGGAGTGGATACAGAGGGCCAGAGAGTTCAGTGACCTCCTTTGAGGACTCGAGCCAAGCCACAGCTGAGGAGATCCACCTGCTTTTCTTCCTGTGGATCCTCCTCTACTGCCTCTTCCTCCTTCCGCAACTCGACCTCCAGACTCTGCCACAGTTTTTCTTCAACTAAGAAATGAAACCAAGGCTTAAGGCGTTAGATGCACTATGGTACTTAAATCTGCTTCAAAATCGATGTTTACGGACAAGGGGAGGCTTAGAACAAAACCTGCAAATATGAATCCAGGTGGGCCATTCAGTTCGTACAATGTCCATTTTGGAGTTCATTAATAATtcacatgtgttttgttttgtatgctttTGAATACTGATTTTTAGCTTCCTCTGTGGTTCGAAAGCATTTGAAAAGTAGAATGTatacatgtctttttttttttttacttggttACTTTTACTCTGGATTTGTATATAGACAACTTAAATATGATTACAATTTAGTTTCATGTTAGAGGCAAGTGACCTTTATTGCTTTCTCTTTGTGCAACATGGAGTTATTCTAGTTTGTAATGCTTAAGCAATTTCCGTTTATAAATCATTCTTATTGTTTACCTAAGAGCCAGTAATTTAATATAAGAAGGACAATgaacttttctttgtttttttaaccttttatgtTTCTCCTTAACCACTGTCTAAATGCTCTGGTTATTTTACAAAGAAATAACTAGCTTTGAAATTGAGCACACCTTAAAGGTACAATATGTTGTATGAGATACAGAAGGTAgtatattaaaaagacaaagcacATTTAATTGGCTTTGGTCTTTGAATTCTCCACTACTCTCATTGACTGCTTGAAGATAATGCTTATTTATGTAAACTGCACTTTTGATGGACATAAACTGCCAAAGAAACAGTATTTTGAGCGGTGAAAGGCTGGGCCTTCTGGTTTGCTTTAGTCACAAAATGAATATAAGCTTGGTTTGTTTATTCccacatatatattacaattaggAGAACTTATTCAGGTGTGACAGTATCTAGTAaacttatatttgtatattttgaaaaaactgaaatagagAATGAAGCTTTTTGAAGCTGATGGATCTTAAAATATGAAGAATGGATTTCTGaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000471 True 4019 mRNA 0.43 13 15650291 15669353

Neighbor

gene id symbol gene type direction distance location
AMCG00000470 NA coding upstream 8994 15620646 ~ 15641297 (+)
AMCG00000478 NA coding upstream 208004 15426545 ~ 15442287 (+)
AMCG00000474 eml5 coding upstream 266290 15352977 ~ 15384001 (+)
AMCG00000473 NA coding upstream 355822 15292315 ~ 15294469 (+)
AMCG00000462 eif2b2 coding upstream 368829 15278456 ~ 15281462 (+)
AMCG00000484 dicer1,LOC107552827,LOC107668604,LOC107671118 coding downstream 9349 15678702 ~ 15694287 (+)
AMCG00000485 gsc,LOC101076325,LOC102791948,LOC103364184 coding downstream 65443 15734796 ~ 15736604 (+)
AMCG00000489 NA coding downstream 83072 15752425 ~ 15758447 (+)
AMCG00000483 NA coding downstream 354530 16023883 ~ 16029161 (+)
AMCG00000491 galc,LOC107372531 coding downstream 528928 16198281 ~ 16208276 (+)
G150563 NA non-coding upstream 31265 15615130 ~ 15619026 (+)
G150506 NA non-coding upstream 350413 15295607 ~ 15299878 (+)
G150484 NA non-coding upstream 399562 15250517 ~ 15250729 (+)
G150475 NA non-coding upstream 421029 15228957 ~ 15229262 (+)
G150460 NA non-coding upstream 489614 15160457 ~ 15160677 (+)
G150642 NA non-coding downstream 521467 16190820 ~ 16191021 (+)
G150686 NA non-coding downstream 975775 16645128 ~ 16646915 (+)
G150687 NA non-coding downstream 978552 16647905 ~ 16649574 (+)
G150689 NA non-coding downstream 1012562 16681915 ~ 16722627 (+)
G150767 NA non-coding downstream 1527124 17196477 ~ 17501853 (+)
AMCG00000443 esrrb,LOC106611051,LOC101473368,LOC100708924 other upstream 705891 14931778 ~ 14944400 (+)
AMCG00000412 pgf,LOC102799665,LOC102204058,LOC106593515,LOC106611025 other upstream 1496451 14133138 ~ 14153840 (+)
G150069 NA other upstream 1957702 13690839 ~ 13692589 (+)
AMCG00000381 NA other upstream 2619438 12966877 ~ 13030853 (+)
G149859 NA other upstream 2922388 12679670 ~ 12727903 (+)
AMCG00000514 NA other downstream 1142100 16811453 ~ 16814365 (+)
G150750 NA other downstream 1266640 16935993 ~ 16938282 (+)
G150811 NA other downstream 1876101 17545454 ~ 17548508 (+)
AMCG00000525 NA other downstream 2079157 17748510 ~ 17759582 (+)
G150976 NA other downstream 2484511 18153864 ~ 18159321 (+)

Expression


Co-expression Network