AMCG00000513


Basic Information

Item Value
gene id AMCG00000513
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 16814843 ~ 16849247 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000513
ATGAAGGCTAAAAATCTAGCAGTCTGTAACAGCTGGCAGGTGTACAAACGTGATTGTGGACTTCTTTCAGAAAAGGCAATTCCCCTGAAAGATTTCCGCCTTAGCATCGATAGTTTGCGCAAGTCTGTAAAGAAACCTGGGCGTCCGTCACTCTCAAGCGCCCCAGTGAATGCAGGGAGGCAGCGAGCCCCACGGTGTGCTAGGCCTACCACTGAGACAAGTCATGATGGCTTTGGACATTTCCCAGTGTTTGAGCCAGTCAGGAGAATATGCAAGTTGTGCCCTACTAAGATGAAAACCTACTGGAGGTCCAGCAAATGCTTAGATGGTCAGTTGGCCCTTTGTCTGTCCTCAGAAAGAAACTGCTTTatgaagaagaagaagaagaagaagaagaagaagaagaagaatgaagCTGTTGGGGCCAAGACAAGTCTCCTGCTGTTGTTCGGCAGGAAGAAGCTGCTTCACGAGCCCTAG

Function

GO:

id name namespace
GO:0006325 chromatin organization biological_process
GO:0008213 protein alkylation biological_process
GO:0043414 macromolecule methylation biological_process
GO:0006479 protein methylation biological_process
GO:0016569 covalent chromatin modification biological_process
GO:0016570 histone modification biological_process
GO:0016571 histone methylation biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000513 True 480 mRNA 0.48 4 16814843 16849247

Neighbor

gene id symbol gene type direction distance location
AMCG00000512 NA coding upstream 13049 16796093 ~ 16801794 (+)
AMCG00000495 ccnk,LOC107560198,LOC107678663 coding upstream 69099 16740684 ~ 16745744 (+)
AMCG00000486 vrk1 coding upstream 523346 16280906 ~ 16291497 (+)
AMCG00000490 papola,LOC107560206,LOC107747941,LOC107678672 coding upstream 582412 16216282 ~ 16232431 (+)
AMCG00000492 NA coding upstream 599372 16208705 ~ 16215471 (+)
AMCG00000502 NA coding downstream 94813 16944060 ~ 16944477 (+)
AMCG00000498 adck1 coding downstream 157222 17006469 ~ 17051834 (+)
AMCG00000503 NA coding downstream 254833 17104080 ~ 17106602 (+)
AMCG00000504 nrxn3,LOC101487700,LOC107751785,LOC102792091,LOC107676277 coding downstream 321003 17170250 ~ 17183080 (+)
AMCG00000508 NA coding downstream 342534 17191781 ~ 17194116 (+)
G150689 NA non-coding upstream 92216 16681915 ~ 16722627 (+)
G150687 NA non-coding upstream 165269 16647905 ~ 16649574 (+)
G150686 NA non-coding upstream 167928 16645128 ~ 16646915 (+)
G150642 NA non-coding upstream 623822 16190820 ~ 16191021 (+)
G150563 NA non-coding upstream 1195817 15615130 ~ 15619026 (+)
G150767 NA non-coding downstream 347230 17196477 ~ 17501853 (+)
G150831 NA non-coding downstream 806329 17655576 ~ 17702341 (+)
G150877 NA non-coding downstream 1020051 17869298 ~ 17870290 (+)
G150886 NA non-coding downstream 1100687 17949934 ~ 17971252 (+)
G150909 NA non-coding downstream 1125078 17974325 ~ 17974800 (+)
AMCG00000514 NA other upstream 478 16811453 ~ 16814365 (+)
AMCG00000443 esrrb,LOC106611051,LOC101473368,LOC100708924 other upstream 1870443 14931778 ~ 14944400 (+)
AMCG00000412 pgf,LOC102799665,LOC102204058,LOC106593515,LOC106611025 other upstream 2661003 14133138 ~ 14153840 (+)
G150069 NA other upstream 3122254 13690839 ~ 13692589 (+)
AMCG00000381 NA other upstream 3783990 12966877 ~ 13030853 (+)
G150750 NA other downstream 86746 16935993 ~ 16938282 (+)
G150811 NA other downstream 696207 17545454 ~ 17548508 (+)
AMCG00000525 NA other downstream 899263 17748510 ~ 17759582 (+)
G150976 NA other downstream 1304617 18153864 ~ 18159321 (+)
AMCG00000550 NA other downstream 1562196 18411443 ~ 18419576 (+)

Expression


Co-expression Network