Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00000545 |
| gene name | LOC104965446 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 18161502 ~ 18176216 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A-like |
| id | name | namespace |
|---|---|---|
| GO:0030488 | tRNA methylation | biological_process |
| GO:0031515 | tRNA (m1A) methyltransferase complex | cellular_component |
| GO:0016429 | tRNA (adenine-N1-)-methyltransferase activity | molecular_function |
| id | description |
|---|---|
| K07442 | TRM61, GCD14; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00000545 | True | 1126 | mRNA | 0.67 | 4 | 18161502 | 18176216 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000547 | NA | coding | upstream | 8141 | 18125808 ~ 18153361 (+) |
| AMCG00000549 | LOC106607643,LOC105020469 | coding | upstream | 43236 | 18106891 ~ 18118266 (+) |
| AMCG00000546 | eif5,LOC108435020 | coding | upstream | 60630 | 18093989 ~ 18100872 (+) |
| AMCG00000536 | NA | coding | upstream | 141620 | 18011000 ~ 18019882 (+) |
| AMCG00000537 | ppp2r3c,LOC106611177 | coding | upstream | 156654 | 17998807 ~ 18004848 (+) |
| AMCG00000561 | NA | coding | downstream | 25266 | 18201482 ~ 18204980 (+) |
| AMCG00000563 | klc1 | coding | downstream | 46270 | 18222486 ~ 18240942 (+) |
| AMCG00000562 | zfyve21,LOC106610961 | coding | downstream | 68872 | 18245088 ~ 18251664 (+) |
| AMCG00000555 | LOC104966444 | coding | downstream | 132120 | 18308336 ~ 18336447 (+) |
| AMCG00000551 | NA | coding | downstream | 216200 | 18392416 ~ 18404797 (+) |
| G150953 | NA | non-coding | upstream | 76815 | 18084460 ~ 18084687 (+) |
| G150951 | NA | non-coding | upstream | 80161 | 18078114 ~ 18081341 (+) |
| G150913 | NA | non-coding | upstream | 98156 | 17994559 ~ 18063346 (+) |
| G150909 | NA | non-coding | upstream | 186702 | 17974325 ~ 17974800 (+) |
| G150886 | NA | non-coding | upstream | 190250 | 17949934 ~ 17971252 (+) |
| G151050 | NA | non-coding | downstream | 183031 | 18359247 ~ 18360292 (+) |
| G151052 | NA | non-coding | downstream | 208384 | 18384600 ~ 18385046 (+) |
| G151217 | NA | non-coding | downstream | 683047 | 18859263 ~ 18859464 (+) |
| G151219 | NA | non-coding | downstream | 686808 | 18863024 ~ 18868044 (+) |
| G151226 | NA | non-coding | downstream | 743705 | 18919921 ~ 18921366 (+) |
| G150976 | NA | other | upstream | 2181 | 18153864 ~ 18159321 (+) |
| AMCG00000525 | NA | other | upstream | 401920 | 17748510 ~ 17759582 (+) |
| G150811 | NA | other | upstream | 612994 | 17545454 ~ 17548508 (+) |
| G150750 | NA | other | upstream | 1223220 | 16935993 ~ 16938282 (+) |
| AMCG00000514 | NA | other | upstream | 1347137 | 16811453 ~ 16814365 (+) |
| AMCG00000550 | NA | other | downstream | 235227 | 18411443 ~ 18419576 (+) |
| AMCG00000573 | NA | other | downstream | 313635 | 18489851 ~ 18530757 (+) |
| AMCG00000572 | mnat1,LOC107757134,LOC107675563 | other | downstream | 358253 | 18534469 ~ 18565627 (+) |
| G151522 | gpr135,LOC107564991 | other | downstream | 1793123 | 19969339 ~ 19972015 (+) |
| G151676 | NA | other | downstream | 2665722 | 20841938 ~ 20843463 (+) |
