AMCG00000551


Basic Information

Item Value
gene id AMCG00000551
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 18392416 ~ 18404797 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000551
ATGACGAAGCTTAGAGTCTCGTTCGACCACGGCTGGTTGACGGAGCAGCGTTGCCGGCAGGACATGACCAGGGCCGGCCGGGACAGCGAGCTGATGGTGCACTtcctgctgctggagctggagacAGTGGGGAACATCCGCTTCGAGGAGGGCAGCTCAGCCAACTCCTGGTTCGTCTCCTGCTACGACCTGATCCTGTCCCGGTTCTGCGCCGCGGACTTTGGGGCGTTTGGCGTCTCCGGGATCAAGATCAACCGCATCCTGCGTGTCCACAACCGGGCGCTGCGGCTGCGCTTTGAGGACCAGCTGCACGCCCTGCTGGCCGGCGAGGAGTCCAGCGTCTTCGCACAGAACTACAAGCGCTGGCTGGACTACCTGTTCTACGTGCCCGACCCAGAGTGTGCCGGCGAGGAGGAAGAACTGCGGCGCATTCCTGAGCACGGGTTCCTCGCGACAGACTCCTATAAGGCTCTGGGTCGAGAGAGAGCCGTGCCCCTCGCCAACAGCCTGAGTCTGTGTGAGCGGCCCAGGATGCAGTACCTGCTGGATCAAGCTGAGGCCCGTGGCCAGAGCGGTACCGACCCGCTCCCCTTCAGACACGGCCAGATTGTCATTGCCAAAGCGTTCCTGGGCCACAGTGTCCCGGCACAGGACGGGCAGCCGGTTGACTCGGACAGCTACCCGAAGGCTCACTCTGTCTTCCGCAACGCCTACAAGGGGAAGAGTGCGCCGGCGGCGGCAGTTACAGGTCGGCCCTGCTCCGCCCGTCCACATGGCAGCTGTGACTGCAGCCGGCGCCAGAGTGAGTGGTTTGTGTTCGACCATGAGCTCGTCCTGCCGGAGTACCTCATCGACTTCCAGTACATCACTGAGGCCGTGACCCCCGACGCCCAGTTAGACGGCCCTGCGGAGGACGGCCCCGGTGTGAACTCGGCCTGCGAGGTCAGCCTGGACAAGGAGGCGCTGAGTCTGGAGCCAGCCTCCAGGCCCCATCCCAAGATGATCTGCCTGGACAAGAGGAGCATGCTGGCAGCGGCGCAGGCCGTCGAGCTGAGCCAGATCACAGTGCTCAGCCTCCACGGGAGCAGCCTGAGCCGACTGAAGGAGGTCTCTCGCCTCACAGCCCTGCGCAGACTGACCGTCAGCTTCAGCGAGCTCACACATCTGGAAGACATTTCACATCTGCCCAGCCTGGAGTTTGTTGACgccagcttcaaccacattgtgACCTTGGAGGGGCTGCGGGGGCTGAGCCGCCTGAAGAGCCTAGACCTGAGCTGGAACCGGCTGAGCCGAGCGCGGGAGGAGGCCGCTGTCCTGAGGAAACACGTGCCCGCACTGCTGACCCTGGACCTCCGACACAACCCCTGGCACAGGCCGGAGTCGGTGCGTGTGGTCGTGTTGGGGTGTCTGAAGACCCTCACCCACCTGGACGGGTGCCTGGTCAGCGAGGAGGAAGTGGCCCTGGCCGTGCAGATCACCGCAGGCTCCAGGATCAGCCAGGCCTCTCTGCTGGCTCACTCCAGGACCGACCCAGCCCGGCCACGCTGCCTCAGCCTCCTGTCCGCTGCCCAGCTCCTGACCTGTCTCAACCCGAGCCCCTGGGACTCCCCTGCCGAGCCAGAACCAGGCTGGACCTCGAAGATCACGGCCCTGAACCTCGACGGACAGGGGCTCTCCCGGCTCACCAACCTGGACCAGCTGGTGAACCTGCGCTGGGCGTCCTTCAACGACAACGACATCGCCAGGATCGAGGGGCTGGACGGCTGCCGGCTACTGGAGGAGCTGTCGCTGGATCACAACTGCATCTCCCGGCTGGAGGGACTCTCCCAGCTGGGCAGTCTGACCCGGCTCAGCCTGAACGGGAACCAGCTGTCCAGCCTGGAGGGGGGGGGCCTGGAGAAGCTGCTCCACCTGCACTTCCTGTCCCTGGAGAACAACAGGGTGGGCTCCCTGCGCGGGCTGCACCGGGCCAGGGGGCTGATCGAGCTGTACCTGGGGCACAACGCCATCGCCTCGGCCAGGGAGGTGCACCACATTAAGGAGGGGGCGGAGAGCGAACACGCCAGGGACGAGCTGGGGGGCCGGCTGACTCCCGACATGGTGTCAGAGAAACTGGGCCACTCTGACTATGCCGACGTCTTCGAGCTGGACATCCCCTCTGCGGCCATCAGGACCGTGGACCTGGCCCCTACCGATCAGTTCCGCAGCATCCGCAGCGTCAACCTGGAGAACAACAACCTGACATCCTTCAGCGGCCTGGTGTTTCTGCCCAACGTCAAGGTCTTGTGTCTGAACCACAACCGCATCGAGTCCATCCTGCCCCGGCAGAAGACGCAGACCCCTCTGAACAACAGGCAGATGCTGTACCAGAAGGTGAACTCCAGTGGCTACGGGCAGCAGGGCGCGTCACGGGGCAGCAGCCACAATGGCGTCTCCAGTCTGGCCCAGCTCCAGCTCAGCCGGCTCAGCAACTTAAAGGCGCTCTTTCTACAGGGTAATGAACTGAGCCAGATTGAGGGCCTGGAGGGGTTGAAACAGCTGCGGGAGCTGGCGCTGGACCGGAACCGCATCAAGTCCGTGGGTGAGAGCTCCTTTGCCGGCCAGGCCGCGCTGGTGGAGCTGCACCTGGCGGAGAACCGCGTCCGAGAGCTCGGCCACCTGCAGCCCCTGCCACAGCTGCGCCGGCTGTTCCTGAGCGGCAACAAGATCCAGGTGGCCAGGAAGGGCGGGCACCGTGCCGTGGTGGTGCTGCGGCTGCCGGGCCTGCAGGTGCTGGACAGGGAAGCCGTGACGCTGGAGGAGAGGACGCGTGCCGAGCTGCAGTGCCCCGACGCCCAGTGGTCCCCGTCGGCCAGCTCCGCCCTGGACCTCGGCGTGCCGGGCCTGCTGCCCCTGGTGGCCCGAGCGGCGCCCCTGCGCGGGACCGGCCTGGCCCAACCCGTGTCGCTGCAGCACTTCCTGGGTCACGACCTCCTGCTGCCCTGCGGAGTGGAGGAGGCGCCGCTCTACAGCACACACAAGCACAAGAGGCCGAAGCAGGGTCCCGGCCTGGCGGCTCACACCCGCAGCGTCCACGCCGAGCTGGCATACCGGCATCTGCGCGGAGGGGGGGGCGCCCTGCTGCAGCACACCGGCCCCCGTCTGCTCTACGGCTTCCCCCCCACTCAGGAGCAGGACGGCAGgctgCACAGTCACAGCGCTCCCAGACCCCCCCGTACGTAGAGCGACAGGAGCGACAACGGCAGGATCTCCGTCTGCGCAGGGAGACGCAgcccctctcacacacacacacacacacacacacacacaaactctctctctctctcacaatcacactctcactcacattcaaacacacacaccccagcaCCCATCCCTCACCCCCAGGACAAAATCCAACTCACACAATGATATGTGACTCTGTATGAATGCAAGTGCAGTTCATTAAATGCTTTGTTTCGACAGCAGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000551 True 3474 mRNA 0.65 23 18392416 18404797

Neighbor

gene id symbol gene type direction distance location
AMCG00000555 LOC104966444 coding upstream 55969 18308336 ~ 18336447 (+)
AMCG00000562 zfyve21,LOC106610961 coding upstream 140752 18245088 ~ 18251664 (+)
AMCG00000563 klc1 coding upstream 151474 18222486 ~ 18240942 (+)
AMCG00000561 NA coding upstream 187436 18201482 ~ 18204980 (+)
AMCG00000545 LOC104965446 coding upstream 216200 18161502 ~ 18176216 (+)
AMCG00000552 ppm1a,LOC106610975 coding downstream 24118 18428915 ~ 18433601 (+)
AMCG00000553 six6,six6a,LOC107743981,LOC106598791,LOC107588601 coding downstream 75574 18480371 ~ 18483206 (+)
AMCG00000571 NA coding downstream 164368 18569165 ~ 18583738 (+)
AMCG00000579 prkch,LOC100380676,LOC107675581,LOC107548619 coding downstream 197753 18602550 ~ 18606788 (+)
AMCG00000580 NA coding downstream 206110 18610907 ~ 18613346 (+)
G151052 NA non-coding upstream 7370 18384600 ~ 18385046 (+)
G151050 NA non-coding upstream 32124 18359247 ~ 18360292 (+)
G150953 NA non-coding upstream 307729 18084460 ~ 18084687 (+)
G150951 NA non-coding upstream 311075 18078114 ~ 18081341 (+)
G150913 NA non-coding upstream 329070 17994559 ~ 18063346 (+)
G151217 NA non-coding downstream 454466 18859263 ~ 18859464 (+)
G151219 NA non-coding downstream 458227 18863024 ~ 18868044 (+)
G151226 NA non-coding downstream 515124 18919921 ~ 18921366 (+)
G151310 NA non-coding downstream 725828 19130625 ~ 19130890 (+)
G151339 NA non-coding downstream 900449 19305246 ~ 19307462 (+)
G150976 NA other upstream 233095 18153864 ~ 18159321 (+)
AMCG00000525 NA other upstream 632834 17748510 ~ 17759582 (+)
G150811 NA other upstream 843908 17545454 ~ 17548508 (+)
G150750 NA other upstream 1454134 16935993 ~ 16938282 (+)
AMCG00000514 NA other upstream 1578051 16811453 ~ 16814365 (+)
AMCG00000550 NA other downstream 6646 18411443 ~ 18419576 (+)
AMCG00000573 NA other downstream 85054 18489851 ~ 18530757 (+)
AMCG00000572 mnat1,LOC107757134,LOC107675563 other downstream 129672 18534469 ~ 18565627 (+)
G151522 gpr135,LOC107564991 other downstream 1564542 19969339 ~ 19972015 (+)
G151676 NA other downstream 2437141 20841938 ~ 20843463 (+)

Expression


Co-expression Network