Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00000561 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 18201482 ~ 18204980 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| K23506 | APOPT1; apoptogenic protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00000561 | True | 938 | mRNA | 0.60 | 5 | 18201482 | 18204980 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000545 | LOC104965446 | coding | upstream | 25266 | 18161502 ~ 18176216 (+) |
| AMCG00000547 | NA | coding | upstream | 48121 | 18125808 ~ 18153361 (+) |
| AMCG00000549 | LOC106607643,LOC105020469 | coding | upstream | 83216 | 18106891 ~ 18118266 (+) |
| AMCG00000546 | eif5,LOC108435020 | coding | upstream | 100610 | 18093989 ~ 18100872 (+) |
| AMCG00000536 | NA | coding | upstream | 181600 | 18011000 ~ 18019882 (+) |
| AMCG00000563 | klc1 | coding | downstream | 17506 | 18222486 ~ 18240942 (+) |
| AMCG00000562 | zfyve21,LOC106610961 | coding | downstream | 40108 | 18245088 ~ 18251664 (+) |
| AMCG00000555 | LOC104966444 | coding | downstream | 103356 | 18308336 ~ 18336447 (+) |
| AMCG00000551 | NA | coding | downstream | 187436 | 18392416 ~ 18404797 (+) |
| AMCG00000552 | ppm1a,LOC106610975 | coding | downstream | 223935 | 18428915 ~ 18433601 (+) |
| G150953 | NA | non-coding | upstream | 116795 | 18084460 ~ 18084687 (+) |
| G150951 | NA | non-coding | upstream | 120141 | 18078114 ~ 18081341 (+) |
| G150913 | NA | non-coding | upstream | 138136 | 17994559 ~ 18063346 (+) |
| G150909 | NA | non-coding | upstream | 226682 | 17974325 ~ 17974800 (+) |
| G150886 | NA | non-coding | upstream | 230230 | 17949934 ~ 17971252 (+) |
| G151050 | NA | non-coding | downstream | 154267 | 18359247 ~ 18360292 (+) |
| G151052 | NA | non-coding | downstream | 179620 | 18384600 ~ 18385046 (+) |
| G151217 | NA | non-coding | downstream | 654283 | 18859263 ~ 18859464 (+) |
| G151219 | NA | non-coding | downstream | 658044 | 18863024 ~ 18868044 (+) |
| G151226 | NA | non-coding | downstream | 714941 | 18919921 ~ 18921366 (+) |
| G150976 | NA | other | upstream | 42161 | 18153864 ~ 18159321 (+) |
| AMCG00000525 | NA | other | upstream | 441900 | 17748510 ~ 17759582 (+) |
| G150811 | NA | other | upstream | 652974 | 17545454 ~ 17548508 (+) |
| G150750 | NA | other | upstream | 1263200 | 16935993 ~ 16938282 (+) |
| AMCG00000514 | NA | other | upstream | 1387117 | 16811453 ~ 16814365 (+) |
| AMCG00000550 | NA | other | downstream | 206463 | 18411443 ~ 18419576 (+) |
| AMCG00000573 | NA | other | downstream | 284871 | 18489851 ~ 18530757 (+) |
| AMCG00000572 | mnat1,LOC107757134,LOC107675563 | other | downstream | 329489 | 18534469 ~ 18565627 (+) |
| G151522 | gpr135,LOC107564991 | other | downstream | 1764359 | 19969339 ~ 19972015 (+) |
| G151676 | NA | other | downstream | 2636958 | 20841938 ~ 20843463 (+) |
