G149455


Basic Information

Item Value
gene id G149455
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 10034574 ~ 10035072 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU188081
CTTGTTGTCTGTGCTTTTTGTTTCCAAAATCAAACTGTCAAGTTCCTTTAcctttgtggaaaaataaagaaacacacattatGATCTATTTAACACAGTTTAGctattaatgattaaatatgcaGTCTGAAACAAACCCACTGCTCATTCTATAAAGTAATGCTACAGACATTCCTATCTTAATCAGCTAAAGACTAATTCAGTTAGATGGTTAGAAAGGGAAATCAGTAGCAAAACTATTAAAATTGGCAAGACTCTTTTGCATCTGTATGTCCACTCCTCCCCACAATGTGCTCTGTCCACAGGTAGAGAGAGTAAGAGAGGGTCTCACGTCAGCAGGCCCCTTGTCAGCGGCGGCCACGCAGCTCAGGATGATGCTGTCGCAGTCGTTCTTGGTGGCGGCTCCAGACTCGCTCACACACTTCAGCAGCTGCCGGATCTCCTTGAACTGCCGTTGCTTGACCAGCCGCTTTGCTGCCTTGTTGTATACTGCCGCTGC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188081 True 499 lncRNA 0.44 1 10034574 10035072

Neighbor

gene id symbol gene type direction distance location
AMCG00000306 arg2 coding upstream 24463 10002721 ~ 10010111 (+)
AMCG00000292 NA coding upstream 114492 9911136 ~ 9920082 (+)
AMCG00000294 smoc1 coding upstream 157630 9864987 ~ 9876944 (+)
AMCG00000293 NA coding upstream 194145 9828089 ~ 9840429 (+)
AMCG00000282 NA coding upstream 287566 9721890 ~ 9747008 (+)
AMCG00000307 NA coding downstream 28739 10063811 ~ 10072297 (+)
AMCG00000297 atp6v1d,LOC106571673,LOC107559096,LOC107568214 coding downstream 57921 10092993 ~ 10100250 (+)
AMCG00000305 NA coding downstream 513758 10548830 ~ 10549199 (+)
AMCG00000304 NA coding downstream 514860 10549932 ~ 10550914 (+)
AMCG00000314 dnal1 coding downstream 1092786 11127858 ~ 11131679 (+)
G149454 NA non-coding upstream 3788 10029694 ~ 10030786 (+)
G149450 NA non-coding upstream 12721 10021422 ~ 10021853 (+)
G149415 NA non-coding upstream 59402 9973048 ~ 9975172 (+)
G149416 slc39a9,LOC107721951,LOC107664419 non-coding upstream 72003 9957713 ~ 9962571 (+)
G149359 LOC103376870 non-coding upstream 257586 9719947 ~ 9776988 (+)
G149464 NA non-coding downstream 13324 10048396 ~ 10048621 (+)
G149465 NA non-coding downstream 14193 10049265 ~ 10049532 (+)
G149466 NA non-coding downstream 16104 10051176 ~ 10051753 (+)
G149486 NA non-coding downstream 55811 10090883 ~ 10091107 (+)
G149538 NA non-coding downstream 677405 10712477 ~ 10712681 (+)
G149424 NA other upstream 63773 9969324 ~ 9970801 (+)
AMCG00000281 cpsf2,LOC106608196 other upstream 443486 9561557 ~ 9591088 (+)
AMCG00000286 sos2 other upstream 488163 9514822 ~ 9546411 (+)
AMCG00000285 map4k5 other upstream 547885 9440061 ~ 9486689 (+)
AMCG00000249 acta1,actc1,LOC103383882,LOC105024319 other upstream 1449301 8579717 ~ 8585273 (+)
G149525 LOC100846954,LOC107575789 other downstream 499518 10534590 ~ 10535137 (+)
AMCG00000352 NA other downstream 1930483 11965555 ~ 11995026 (+)
G149859 NA other downstream 2644598 12679670 ~ 12727903 (+)
AMCG00000381 NA other downstream 2931805 12966877 ~ 13030853 (+)
G150069 NA other downstream 3655767 13690839 ~ 13692589 (+)

Expression


Co-expression Network