G149602


Basic Information

Item Value
gene id G149602
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 11437369 ~ 11437819 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU188253
gcaacagaagagttaacctgggagaaggagattgagccgtacgaagaattctttattaaataaagaactttacagactgcgcatgcccgcctgtgcccacctgatcagtggagttttacagctggacaattgactaagtcgactgtatacgaaagtgtcagtcatttaaatagctatttgagtcttaagaaacttgacccttggaacgaacagggccctgctttcctcaaagactttgtcttcaagtaactacggtggaaccctgcttacaaagaagattttgtgcacaaccttggagccttcaaaccagtggaaaatctgtttggaaaagactctacattcgcgaaaccccaacttccaggtgcatcgaccgAGTGGAAGTTACTGGACAAAGCCAAACCGgcctgcctttgttccaaaccacacggacctcgtgccgtgtgctgttatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188253 True 451 lncRNA 0.46 1 11437369 11437819

Neighbor

gene id symbol gene type direction distance location
AMCG00000315 NA coding upstream 204354 11221715 ~ 11233015 (+)
AMCG00000313 NA coding upstream 267427 11147655 ~ 11169942 (+)
AMCG00000314 dnal1 coding upstream 305690 11127858 ~ 11131679 (+)
AMCG00000304 NA coding upstream 886455 10549932 ~ 10550914 (+)
AMCG00000305 NA coding upstream 888170 10548830 ~ 10549199 (+)
AMCG00000350 tmem121a,tmem121,LOC107594772,LOC107377718,LOC107674105 coding downstream 132526 11570345 ~ 11571229 (+)
AMCG00000327 NA coding downstream 234388 11672207 ~ 11674687 (+)
AMCG00000325 NA coding downstream 239334 11677153 ~ 11679698 (+)
AMCG00000326 NA coding downstream 247735 11685554 ~ 11688479 (+)
AMCG00000323 NA coding downstream 266776 11704595 ~ 11714618 (+)
G149595 NA non-coding upstream 69144 11338391 ~ 11368225 (+)
G149591 NA non-coding upstream 110818 11326186 ~ 11326551 (+)
G149587 NA non-coding upstream 214262 11222829 ~ 11223107 (+)
G149572 NA non-coding upstream 261303 11175662 ~ 11176066 (+)
G149566 NA non-coding upstream 303336 11133401 ~ 11134033 (+)
G149666 NA non-coding downstream 349274 11787093 ~ 11791091 (+)
G149667 NA non-coding downstream 354052 11791871 ~ 11792096 (+)
G149668 NA non-coding downstream 355548 11793367 ~ 11794856 (+)
G149672 NA non-coding downstream 359556 11797375 ~ 11798007 (+)
G149673 NA non-coding downstream 361742 11799561 ~ 11799878 (+)
G149525 LOC100846954,LOC107575789 other upstream 902232 10534590 ~ 10535137 (+)
G149424 NA other upstream 1466568 9969324 ~ 9970801 (+)
AMCG00000281 cpsf2,LOC106608196 other upstream 1846281 9561557 ~ 9591088 (+)
AMCG00000286 sos2 other upstream 1890958 9514822 ~ 9546411 (+)
AMCG00000285 map4k5 other upstream 1950680 9440061 ~ 9486689 (+)
AMCG00000352 NA other downstream 527736 11965555 ~ 11995026 (+)
G149859 NA other downstream 1241851 12679670 ~ 12727903 (+)
AMCG00000381 NA other downstream 1529058 12966877 ~ 13030853 (+)
G150069 NA other downstream 2253020 13690839 ~ 13692589 (+)
AMCG00000412 pgf,LOC102799665,LOC102204058,LOC106593515,LOC106611025 other downstream 2695319 14133138 ~ 14153840 (+)

Expression


Co-expression Network