Gene
RNA
| Item | Value |
|---|---|
| gene id | G149674 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 11800000 ~ 11800740 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU188352 | True | 741 | lncRNA | 0.55 | 1 | 11800000 | 11800740 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000324 | jmjd7 | coding | upstream | 65501 | 11732396 ~ 11734499 (+) |
| AMCG00000323 | NA | coding | upstream | 85382 | 11704595 ~ 11714618 (+) |
| AMCG00000326 | NA | coding | upstream | 111521 | 11685554 ~ 11688479 (+) |
| AMCG00000325 | NA | coding | upstream | 120302 | 11677153 ~ 11679698 (+) |
| AMCG00000327 | NA | coding | upstream | 125313 | 11672207 ~ 11674687 (+) |
| AMCG00000332 | NA | coding | downstream | 36053 | 11836793 ~ 11839680 (+) |
| AMCG00000353 | NA | coding | downstream | 65415 | 11866155 ~ 11886897 (+) |
| AMCG00000351 | ivd,LOC107719458 | coding | downstream | 233391 | 12034131 ~ 12041923 (+) |
| AMCG00000339 | NA | coding | downstream | 275316 | 12076056 ~ 12090893 (+) |
| AMCG00000340 | rpusd2 | coding | downstream | 361251 | 12161991 ~ 12169461 (+) |
| G149673 | NA | non-coding | upstream | 122 | 11799561 ~ 11799878 (+) |
| G149672 | NA | non-coding | upstream | 1993 | 11797375 ~ 11798007 (+) |
| G149668 | NA | non-coding | upstream | 5144 | 11793367 ~ 11794856 (+) |
| G149667 | NA | non-coding | upstream | 7904 | 11791871 ~ 11792096 (+) |
| G149666 | NA | non-coding | upstream | 8909 | 11787093 ~ 11791091 (+) |
| G149739 | NA | non-coding | downstream | 226487 | 12027227 ~ 12027443 (+) |
| G149747 | NA | non-coding | downstream | 291647 | 12092387 ~ 12098372 (+) |
| G149869 | LOC105909576,LOC107704376 | non-coding | downstream | 1032799 | 12833539 ~ 12841673 (+) |
| G150042 | NA | non-coding | downstream | 1612125 | 13412865 ~ 13413064 (+) |
| G150066 | LOC100846954,LOC107575789 | non-coding | downstream | 1848663 | 13649403 ~ 13650051 (+) |
| G149525 | LOC100846954,LOC107575789 | other | upstream | 1264863 | 10534590 ~ 10535137 (+) |
| G149424 | NA | other | upstream | 1829199 | 9969324 ~ 9970801 (+) |
| AMCG00000281 | cpsf2,LOC106608196 | other | upstream | 2208912 | 9561557 ~ 9591088 (+) |
| AMCG00000286 | sos2 | other | upstream | 2253589 | 9514822 ~ 9546411 (+) |
| AMCG00000285 | map4k5 | other | upstream | 2313311 | 9440061 ~ 9486689 (+) |
| AMCG00000352 | NA | other | downstream | 164815 | 11965555 ~ 11995026 (+) |
| G149859 | NA | other | downstream | 878930 | 12679670 ~ 12727903 (+) |
| AMCG00000381 | NA | other | downstream | 1166137 | 12966877 ~ 13030853 (+) |
| G150069 | NA | other | downstream | 1890099 | 13690839 ~ 13692589 (+) |
| AMCG00000412 | pgf,LOC102799665,LOC102204058,LOC106593515,LOC106611025 | other | downstream | 2332398 | 14133138 ~ 14153840 (+) |
