Gene
RNA
| Item | Value |
|---|---|
| gene id | G149739 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 12027227 ~ 12027443 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU188424 | True | 217 | lncRNA | 0.54 | 1 | 12027227 | 12027443 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000353 | NA | coding | upstream | 140330 | 11866155 ~ 11886897 (+) |
| AMCG00000332 | NA | coding | upstream | 187547 | 11836793 ~ 11839680 (+) |
| AMCG00000324 | jmjd7 | coding | upstream | 292728 | 11732396 ~ 11734499 (+) |
| AMCG00000323 | NA | coding | upstream | 312609 | 11704595 ~ 11714618 (+) |
| AMCG00000326 | NA | coding | upstream | 338748 | 11685554 ~ 11688479 (+) |
| AMCG00000351 | ivd,LOC107719458 | coding | downstream | 6688 | 12034131 ~ 12041923 (+) |
| AMCG00000339 | NA | coding | downstream | 48613 | 12076056 ~ 12090893 (+) |
| AMCG00000340 | rpusd2 | coding | downstream | 134548 | 12161991 ~ 12169461 (+) |
| AMCG00000346 | NA | coding | downstream | 174727 | 12202170 ~ 12208132 (+) |
| AMCG00000347 | NA | coding | downstream | 226985 | 12254428 ~ 12285830 (+) |
| G149674 | NA | non-coding | upstream | 226487 | 11800000 ~ 11800740 (+) |
| G149673 | NA | non-coding | upstream | 227349 | 11799561 ~ 11799878 (+) |
| G149672 | NA | non-coding | upstream | 229220 | 11797375 ~ 11798007 (+) |
| G149668 | NA | non-coding | upstream | 232371 | 11793367 ~ 11794856 (+) |
| G149667 | NA | non-coding | upstream | 235131 | 11791871 ~ 11792096 (+) |
| G149747 | NA | non-coding | downstream | 64944 | 12092387 ~ 12098372 (+) |
| G149869 | LOC105909576,LOC107704376 | non-coding | downstream | 806096 | 12833539 ~ 12841673 (+) |
| G150042 | NA | non-coding | downstream | 1385422 | 13412865 ~ 13413064 (+) |
| G150066 | LOC100846954,LOC107575789 | non-coding | downstream | 1621960 | 13649403 ~ 13650051 (+) |
| G150106 | NA | non-coding | downstream | 1712333 | 13739776 ~ 13746116 (+) |
| AMCG00000352 | NA | other | upstream | 32201 | 11965555 ~ 11995026 (+) |
| G149525 | LOC100846954,LOC107575789 | other | upstream | 1492090 | 10534590 ~ 10535137 (+) |
| G149424 | NA | other | upstream | 2056426 | 9969324 ~ 9970801 (+) |
| AMCG00000281 | cpsf2,LOC106608196 | other | upstream | 2436139 | 9561557 ~ 9591088 (+) |
| AMCG00000286 | sos2 | other | upstream | 2480816 | 9514822 ~ 9546411 (+) |
| G149859 | NA | other | downstream | 652227 | 12679670 ~ 12727903 (+) |
| AMCG00000381 | NA | other | downstream | 939434 | 12966877 ~ 13030853 (+) |
| G150069 | NA | other | downstream | 1663396 | 13690839 ~ 13692589 (+) |
| AMCG00000412 | pgf,LOC102799665,LOC102204058,LOC106593515,LOC106611025 | other | downstream | 2105695 | 14133138 ~ 14153840 (+) |
| AMCG00000443 | esrrb,LOC106611051,LOC101473368,LOC100708924 | other | downstream | 2904335 | 14931778 ~ 14944400 (+) |
