G149859


Basic Information

Item Value
gene id G149859
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 12679670 ~ 12727903 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU188603
CTCAGATGAACCTGTATCTCTGCCAAGAATCCAGCACAGTTTATAGAAGGTAACCGGGTTATAAGCCAACAGTGTATTtcagcagcaaaaacaaatctttcgGCAAAGAAAGTTCTTACAAACTCCTTACCACAAACTATGAAAAACAGCATAGCTTGGGCGCTGACAGAGACTGTGACCTTGCTGTGCCCAGGATTTGGCTACCACGAACCAAAAGAGAGcttctgcacagctcactccactgagactgctctcctggctgtcactgactccctcagctgtgctcgggcggcctccctctcctcagtcctcatcctccttgacctctctgcagcatttgacactgtcgatcactccatcctcctctcctgccttgctgaccttggaatctctgggactgctctcacctggttctcctcctacctcagcgaccggtcctaccaagtgacatggcgaggctcctcatccaccccccaacctccatcctgggccccatcctgttctctctctatactcactccctgggccccctcatcgcatcccatggtttctcctaccacttctacacttccagtcttttccctcttccgaccctctcatcccctctcgcatctcttcctgcttgtcNNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188603 True 630 TUCP 0.53 3 12679670 12727903

Neighbor

gene id symbol gene type direction distance location
AMCG00000365 NA coding upstream 100431 12572971 ~ 12579239 (+)
AMCG00000359 NA coding upstream 219732 12430058 ~ 12459938 (+)
AMCG00000358 NA coding upstream 256956 12418779 ~ 12422714 (+)
AMCG00000357 yy1a,LOC108411685,LOC108258103,LOC101066055,LOC108425622 coding upstream 280147 12385408 ~ 12399523 (+)
AMCG00000345 NA coding upstream 315647 12356841 ~ 12364023 (+)
AMCG00000380 NA coding downstream 9752 12737655 ~ 12750364 (+)
AMCG00000377 NA coding downstream 36369 12764272 ~ 12784236 (+)
AMCG00000376 dync1h1 coding downstream 62477 12790380 ~ 12824958 (+)
AMCG00000368 wdr20,LOC106610634,LOC101173269 coding downstream 150535 12878438 ~ 12884325 (+)
AMCG00000369 nemf,LOC102775640 coding downstream 170239 12898142 ~ 12920131 (+)
G149747 NA non-coding upstream 581298 12092387 ~ 12098372 (+)
G149739 NA non-coding upstream 652227 12027227 ~ 12027443 (+)
G149674 NA non-coding upstream 878930 11800000 ~ 11800740 (+)
G149673 NA non-coding upstream 879792 11799561 ~ 11799878 (+)
G149672 NA non-coding upstream 881663 11797375 ~ 11798007 (+)
G149869 LOC105909576,LOC107704376 non-coding downstream 105636 12833539 ~ 12841673 (+)
G150042 NA non-coding downstream 684962 13412865 ~ 13413064 (+)
G150066 LOC100846954,LOC107575789 non-coding downstream 921500 13649403 ~ 13650051 (+)
G150106 NA non-coding downstream 1011873 13739776 ~ 13746116 (+)
G150303 NA non-coding downstream 1736989 14464892 ~ 14465302 (+)
AMCG00000352 NA other upstream 684644 11965555 ~ 11995026 (+)
G149525 LOC100846954,LOC107575789 other upstream 2144533 10534590 ~ 10535137 (+)
G149424 NA other upstream 2708869 9969324 ~ 9970801 (+)
AMCG00000281 cpsf2,LOC106608196 other upstream 3088582 9561557 ~ 9591088 (+)
AMCG00000286 sos2 other upstream 3133259 9514822 ~ 9546411 (+)
AMCG00000381 NA other downstream 238974 12966877 ~ 13030853 (+)
G150069 NA other downstream 962936 13690839 ~ 13692589 (+)
AMCG00000412 pgf,LOC102799665,LOC102204058,LOC106593515,LOC106611025 other downstream 1405235 14133138 ~ 14153840 (+)
AMCG00000443 esrrb,LOC106611051,LOC101473368,LOC100708924 other downstream 2203875 14931778 ~ 14944400 (+)
AMCG00000514 NA other downstream 4083550 16811453 ~ 16814365 (+)

Expression


Co-expression Network