G150303


Basic Information

Item Value
gene id G150303
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 14464892 ~ 14465302 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU189157
gcagtggacaggggtcagcatgggcaccctgactggtctgcggctacgcagccccatacgcaacaaactgcgatgcactgtgtgttctgacacctttctatcagaaccagcattcacttttccagcaatttgagctacagtagctcgtctgttggatcggaccacacgggccagccttcgctccccagtGAGCCTTGGTCTCCCAtaaccctgtcgccggttcaccgcttttccttccttggaccacttttgataggtactgaccactgcagaccgggaacaccccacaagagctgcagttttggagatgctctgacccagtcgtctagccgtcacaatttggcccttgtcaaagtcgctctgatccttacgcttgcccatttttcctgcttctaacacatcaactttgag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189157 True 411 lncRNA 0.54 1 14464892 14465302

Neighbor

gene id symbol gene type direction distance location
AMCG00000419 NA coding upstream 106971 14355891 ~ 14357921 (+)
AMCG00000420 NA coding upstream 122729 14341500 ~ 14342163 (+)
AMCG00000416 LOC106608304 coding upstream 124845 14316161 ~ 14340047 (+)
AMCG00000417 lin52,LOC107594798 coding upstream 176573 14286016 ~ 14288319 (+)
AMCG00000421 aldh6a1,LOC102788717,LOC107586880,LOC107664467,LOC107739234 coding upstream 182220 14261409 ~ 14282672 (+)
AMCG00000433 NA coding downstream 76955 14542257 ~ 14545457 (+)
AMCG00000431 LOC107732571 coding downstream 83360 14548662 ~ 14567052 (+)
AMCG00000432 NA coding downstream 102029 14567331 ~ 14572246 (+)
AMCG00000429 NA coding downstream 107422 14572724 ~ 14578029 (+)
AMCG00000430 NA coding downstream 114884 14580186 ~ 14585957 (+)
G150106 NA non-coding upstream 718776 13739776 ~ 13746116 (+)
G150066 LOC100846954,LOC107575789 non-coding upstream 814841 13649403 ~ 13650051 (+)
G150042 NA non-coding upstream 1051828 13412865 ~ 13413064 (+)
G149869 LOC105909576,LOC107704376 non-coding upstream 1623219 12833539 ~ 12841673 (+)
G149747 NA non-coding upstream 2366520 12092387 ~ 12098372 (+)
G150364 NA non-coding downstream 267930 14733232 ~ 14733440 (+)
G150455 NA non-coding downstream 659408 15124710 ~ 15125951 (+)
G150457 NA non-coding downstream 672404 15137706 ~ 15137923 (+)
G150458 NA non-coding downstream 689333 15154635 ~ 15155084 (+)
G150459 NA non-coding downstream 694306 15159608 ~ 15160123 (+)
AMCG00000412 pgf,LOC102799665,LOC102204058,LOC106593515,LOC106611025 other upstream 311052 14133138 ~ 14153840 (+)
G150069 NA other upstream 772303 13690839 ~ 13692589 (+)
AMCG00000381 NA other upstream 1434039 12966877 ~ 13030853 (+)
G149859 NA other upstream 1736989 12679670 ~ 12727903 (+)
AMCG00000352 NA other upstream 2469866 11965555 ~ 11995026 (+)
AMCG00000443 esrrb,LOC106611051,LOC101473368,LOC100708924 other downstream 466476 14931778 ~ 14944400 (+)
AMCG00000514 NA other downstream 2346151 16811453 ~ 16814365 (+)
G150750 NA other downstream 2470691 16935993 ~ 16938282 (+)
G150811 NA other downstream 3080152 17545454 ~ 17548508 (+)
AMCG00000525 NA other downstream 3283208 17748510 ~ 17759582 (+)

Expression


Co-expression Network