G150458


Basic Information

Item Value
gene id G150458
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 15154635 ~ 15155084 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU189349
GAAGCGTGCCGAGGGTGGCCGGGACAGTCTCTGGCTGTAGATGTGCACGGCCCTGGGCATGGAGGACACGCTGCCCTGGTTGCTGTAGCTGCTGGACCTACTGCGCTGCAGAGGCTGGGCGGTGTGGCCGCTCTGTGCCGAGACAGAGGCTGAGCTGGGCCTGGTCAGCAGCGAGGAAGTCCTGGGCAGGGTGGCGGGGGCCAGAGGAGGGCAGGAGCTCTGAGGGGGAGCGGAGGCTGCGGATGCCAGCTGGGCAGAGAGAGGCACGGAGGTGGGAGGGGTGTGCTGGACGTGAATGTGGGAGCTGTCTAAGACCGCCATGTGAGATCTGGACTGTGCAGGCACAGAGCTCTTCAGCTGGGAAGCACTGGGGTTAGCATCAGAGGCACTCAACTCCTCCTCCTTTGACACAGTTACTGCTGTTTGAAAAGGAAATACGGTGTCACTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189349 True 450 lncRNA 0.62 1 15154635 15155084

Neighbor

gene id symbol gene type direction distance location
AMCG00000456 tgfb3,LOC106590795 coding upstream 31034 15110845 ~ 15123601 (+)
AMCG00000448 NA coding upstream 275518 14872432 ~ 14879117 (+)
AMCG00000447 dlst,LOC107092408,LOC105916992 coding upstream 345359 14799725 ~ 14809276 (+)
AMCG00000449 NA coding upstream 374671 14757134 ~ 14779964 (+)
AMCG00000437 fcf1,LOC106589732 coding upstream 398710 14752253 ~ 14755925 (+)
AMCG00000461 clg15h14orf1,LOC106591002,LOC107724257,LOC104921354,LOC107554785,LOC102222511 coding downstream 30363 15185447 ~ 15187339 (+)
AMCG00000468 NA coding downstream 106007 15261091 ~ 15262791 (+)
AMCG00000460 tmed10,LOC106608292 coding downstream 116371 15271455 ~ 15276495 (+)
AMCG00000462 eif2b2 coding downstream 123372 15278456 ~ 15281462 (+)
AMCG00000473 NA coding downstream 137231 15292315 ~ 15294469 (+)
G150457 NA non-coding upstream 16712 15137706 ~ 15137923 (+)
G150455 NA non-coding upstream 28684 15124710 ~ 15125951 (+)
G150364 NA non-coding upstream 421195 14733232 ~ 14733440 (+)
G150303 NA non-coding upstream 689333 14464892 ~ 14465302 (+)
G150106 NA non-coding upstream 1408519 13739776 ~ 13746116 (+)
G150459 NA non-coding downstream 4524 15159608 ~ 15160123 (+)
G150460 NA non-coding downstream 5373 15160457 ~ 15160677 (+)
G150475 NA non-coding downstream 73873 15228957 ~ 15229262 (+)
G150484 NA non-coding downstream 95433 15250517 ~ 15250729 (+)
G150506 NA non-coding downstream 140523 15295607 ~ 15299878 (+)
AMCG00000443 esrrb,LOC106611051,LOC101473368,LOC100708924 other upstream 210235 14931778 ~ 14944400 (+)
AMCG00000412 pgf,LOC102799665,LOC102204058,LOC106593515,LOC106611025 other upstream 1000795 14133138 ~ 14153840 (+)
G150069 NA other upstream 1462046 13690839 ~ 13692589 (+)
AMCG00000381 NA other upstream 2123782 12966877 ~ 13030853 (+)
G149859 NA other upstream 2426732 12679670 ~ 12727903 (+)
AMCG00000514 NA other downstream 1656369 16811453 ~ 16814365 (+)
G150750 NA other downstream 1780909 16935993 ~ 16938282 (+)
G150811 NA other downstream 2390370 17545454 ~ 17548508 (+)
AMCG00000525 NA other downstream 2593426 17748510 ~ 17759582 (+)
G150976 NA other downstream 2998780 18153864 ~ 18159321 (+)

Expression


Co-expression Network