G150642


Basic Information

Item Value
gene id G150642
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 16190820 ~ 16191021 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU189578
TGATGTCAAAGGAAGATATCATTTTAGATGTATGACTTCTTAAATACCATGTCACTTAAGATAAATGTACAATACCACTTGAATCAATGTGGGTTTAAGTAGACTCTAGAGGATTATATGTTAAACCTTAACTTAACCCTATGTTTCCGTGGATTTTAAACAGTGGATGTATATATTCAAGTGTTCTCATCATAGAACTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189578 True 202 lncRNA 0.32 1 16190820 16191021

Neighbor

gene id symbol gene type direction distance location
AMCG00000483 NA coding upstream 161659 16023883 ~ 16029161 (+)
AMCG00000489 NA coding upstream 432373 15752425 ~ 15758447 (+)
AMCG00000485 gsc,LOC101076325,LOC102791948,LOC103364184 coding upstream 454216 15734796 ~ 15736604 (+)
AMCG00000484 dicer1,LOC107552827,LOC107668604,LOC107671118 coding upstream 496533 15678702 ~ 15694287 (+)
AMCG00000471 NA coding upstream 521467 15650291 ~ 15669353 (+)
AMCG00000491 galc,LOC107372531 coding downstream 7260 16198281 ~ 16208276 (+)
AMCG00000492 NA coding downstream 17684 16208705 ~ 16215471 (+)
AMCG00000490 papola,LOC107560206,LOC107747941,LOC107678672 coding downstream 25261 16216282 ~ 16232431 (+)
AMCG00000486 vrk1 coding downstream 89885 16280906 ~ 16291497 (+)
AMCG00000495 ccnk,LOC107560198,LOC107678663 coding downstream 549663 16740684 ~ 16745744 (+)
G150563 NA non-coding upstream 571794 15615130 ~ 15619026 (+)
G150506 NA non-coding upstream 890942 15295607 ~ 15299878 (+)
G150484 NA non-coding upstream 940091 15250517 ~ 15250729 (+)
G150475 NA non-coding upstream 961558 15228957 ~ 15229262 (+)
G150460 NA non-coding upstream 1030143 15160457 ~ 15160677 (+)
G150686 NA non-coding downstream 454107 16645128 ~ 16646915 (+)
G150687 NA non-coding downstream 456884 16647905 ~ 16649574 (+)
G150689 NA non-coding downstream 490894 16681915 ~ 16722627 (+)
G150767 NA non-coding downstream 1005456 17196477 ~ 17501853 (+)
G150831 NA non-coding downstream 1464555 17655576 ~ 17702341 (+)
AMCG00000443 esrrb,LOC106611051,LOC101473368,LOC100708924 other upstream 1246420 14931778 ~ 14944400 (+)
AMCG00000412 pgf,LOC102799665,LOC102204058,LOC106593515,LOC106611025 other upstream 2036980 14133138 ~ 14153840 (+)
G150069 NA other upstream 2498231 13690839 ~ 13692589 (+)
AMCG00000381 NA other upstream 3159967 12966877 ~ 13030853 (+)
G149859 NA other upstream 3462917 12679670 ~ 12727903 (+)
AMCG00000514 NA other downstream 620432 16811453 ~ 16814365 (+)
G150750 NA other downstream 744972 16935993 ~ 16938282 (+)
G150811 NA other downstream 1354433 17545454 ~ 17548508 (+)
AMCG00000525 NA other downstream 1557489 17748510 ~ 17759582 (+)
G150976 NA other downstream 1962843 18153864 ~ 18159321 (+)

Expression


Co-expression Network