G150686


Basic Information

Item Value
gene id G150686
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 16645128 ~ 16646915 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU189631
gAGGAGCAAGAAGGATgtgtttgaaaggaaaataagttTCATAAACTGGAAATGGATAAAACTATTTCTGTAAATGATCAAAATCGCGGATAAAtcctgtttatttaacaaaacgtataaataatgaataataaatagtttgaaacatgtatattaaaaaaaaaaatgaatacaaaaatataaataatgaaatatcgAATGTATGCTAATGCAAAGGATCTGCTTAGCAATTCCCTAAACAGAGCACCATTGAAGTAGATAAATGAAActgtaagaaataaagaaaattaaaaaacagctcTGCAGTGTCTTTCTCCAATTGGAATGATATTCTGAAGTTTTGATATGTAGAATTTTCAAGGCTAGACTTTGCTagtttgtaacacatttttttaagtataataaaaataagaataatagaTGCATGAGACATCACTAAACAActtattatttcttcttattaGTTATAATTCTTGTTATCTTATTAGTTAATTCCCTTCTAGAAGTCTTACTGGAAACAAAGATGCGAAAAAAAGATCCGTGTGCACGATTGGGTTCTCGGTTCACACGTGGAAATATCATACAGGAGAGACAAAAATTAAATCCTAAGCATGTCACGCACTTTGATTTCCTCTCACTTTTTGTTTAGCGATGGCCGTGTTGCCTTATTACCCACAGCAGTCAGACTGGATTTAGACTTCCTCGCAGCTAAGCTCCCAGTGTCATTTAACTGGTCTGGCTGTTTGCATGAAGCAGTTTGGGTGGAATGCTTGGAGGAGGGGCCTGTCAGTTTTCTCTCCCCATGCTGAGTTAATCCTCCCTGCAGGGCACTTCAAAGTGCAGGGTAGTCAAGGATATGGTTAATTACTGAATCTCCTTGAAATTGATGCCAAATCAAGACTTCCCCGGTCCAACTGAATTCTGTCTAGCCAGGACTAATTGTGGGTcctgttttattgtaaaaggCAAGAAAAACACCAGAAAACCCCATAGTTGGGACTGGACTCGTTGTATACTTAGTTCAAGTTGTAGAACTTTGGAAGATGACTTTCATCAGCGAAAGAACCTGCTGTAGACtagagtgcagtgtgtgtatgtgtgtaatgcTGACCATACATTTAATCACATCTCACATTAACTACCCACAATAGGTTCATATATTAAATTTGTTGCTTTTTACCTTTCAGTTAAGACTGTATTATAATCACTACTAAAGCTTCTATAAACTGCCTGTGATTTGTATCCATCCCACAGATATTTTCCCGATGCATTTCTGTTCTGAAATCTGTTTTGTCTCAACATTCGTAATTGTGTGTTTATAGTTTACGTTtggtgtaaaaataatatttgatccCCCCACGaaacattacataatttaaattctacacttcaATTATGACAAGAAGACGTTTTGTGTCTAATTATAGGTTACACACTATAATGAAGGTAACCTGAAGTTTATACCATGGAGTCAAAACTATTGACTTTTGctgctacataaataaattataaaataaaacaaaatgtattattgatgtAGGTGTATCTTGTTCAGTGGCACACTAGAGTATGGCTTATTATGCTTATgctaacaaatataattttgttagTTACTGTTATGGGAGAaacactactaataataatgtgaagCAGCTGTTATTGGACACTGCGATTGCTGTTAAACATTTAGCTTCAGTTTAAGTATAAAGCTCCAAAGTTAATCTGTAGACGTTAGTACTGCAACTCTCCATTtatattctaaaatgtattttaagtcaacaattacat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189631 True 1788 lncRNA 0.34 1 16645128 16646915

Neighbor

gene id symbol gene type direction distance location
AMCG00000486 vrk1 coding upstream 353631 16280906 ~ 16291497 (+)
AMCG00000490 papola,LOC107560206,LOC107747941,LOC107678672 coding upstream 412697 16216282 ~ 16232431 (+)
AMCG00000492 NA coding upstream 429657 16208705 ~ 16215471 (+)
AMCG00000491 galc,LOC107372531 coding upstream 436852 16198281 ~ 16208276 (+)
AMCG00000483 NA coding upstream 615967 16023883 ~ 16029161 (+)
AMCG00000495 ccnk,LOC107560198,LOC107678663 coding downstream 93769 16740684 ~ 16745744 (+)
AMCG00000512 NA coding downstream 149178 16796093 ~ 16801794 (+)
AMCG00000513 NA coding downstream 167928 16814843 ~ 16849247 (+)
AMCG00000502 NA coding downstream 297145 16944060 ~ 16944477 (+)
AMCG00000498 adck1 coding downstream 359554 17006469 ~ 17051834 (+)
G150642 NA non-coding upstream 454107 16190820 ~ 16191021 (+)
G150563 NA non-coding upstream 1026102 15615130 ~ 15619026 (+)
G150506 NA non-coding upstream 1345250 15295607 ~ 15299878 (+)
G150484 NA non-coding upstream 1394399 15250517 ~ 15250729 (+)
G150475 NA non-coding upstream 1415866 15228957 ~ 15229262 (+)
G150687 NA non-coding downstream 990 16647905 ~ 16649574 (+)
G150689 NA non-coding downstream 35000 16681915 ~ 16722627 (+)
G150767 NA non-coding downstream 549562 17196477 ~ 17501853 (+)
G150831 NA non-coding downstream 1008661 17655576 ~ 17702341 (+)
G150877 NA non-coding downstream 1222383 17869298 ~ 17870290 (+)
AMCG00000443 esrrb,LOC106611051,LOC101473368,LOC100708924 other upstream 1700728 14931778 ~ 14944400 (+)
AMCG00000412 pgf,LOC102799665,LOC102204058,LOC106593515,LOC106611025 other upstream 2491288 14133138 ~ 14153840 (+)
G150069 NA other upstream 2952539 13690839 ~ 13692589 (+)
AMCG00000381 NA other upstream 3614275 12966877 ~ 13030853 (+)
G149859 NA other upstream 3917225 12679670 ~ 12727903 (+)
AMCG00000514 NA other downstream 164538 16811453 ~ 16814365 (+)
G150750 NA other downstream 289078 16935993 ~ 16938282 (+)
G150811 NA other downstream 898539 17545454 ~ 17548508 (+)
AMCG00000525 NA other downstream 1101595 17748510 ~ 17759582 (+)
G150976 NA other downstream 1506949 18153864 ~ 18159321 (+)

Expression


Co-expression Network