G150767


Basic Information

Item Value
gene id G150767
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 17196477 ~ 17501853 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU189742
ctggaacccatagacatcaccagatgctgggtttcttccctggtgatgctctgccaggcctgcactgcagctgtctttagttcctgcttgttcttgggtcgttttgccttcagttttgccttcagcaagtgaaatgctgctcaattggattcaggtcaggtgattgacttggccattgcagaacattgtacttcttcaccttaaaaaggTAAtaggttgctttcgcagtatgcttcgggtcattgtccatctgcactg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189742 True 258 lncRNA 0.48 2 17196477 17501853

Neighbor

gene id symbol gene type direction distance location
AMCG00000508 NA coding upstream 2361 17191781 ~ 17194116 (+)
AMCG00000504 nrxn3,LOC101487700,LOC107751785,LOC102792091,LOC107676277 coding upstream 13397 17170250 ~ 17183080 (+)
AMCG00000503 NA coding upstream 89875 17104080 ~ 17106602 (+)
AMCG00000498 adck1 coding upstream 144643 17006469 ~ 17051834 (+)
AMCG00000502 NA coding upstream 252000 16944060 ~ 16944477 (+)
AMCG00000530 NA coding downstream 27864 17529717 ~ 17539409 (+)
AMCG00000526 NA coding downstream 217796 17719649 ~ 17748022 (+)
AMCG00000527 psmc1b,psmc1 coding downstream 258850 17760703 ~ 17768088 (+)
AMCG00000520 LOC107670363,LOC107724957,LOC105896953 coding downstream 293495 17795348 ~ 17800754 (+)
AMCG00000542 ralgapa1,LOC107589631,LOC107693153,LOC107725466,LOC107586611 coding downstream 381976 17883829 ~ 17938428 (+)
G150689 NA non-coding upstream 473850 16681915 ~ 16722627 (+)
G150687 NA non-coding upstream 546903 16647905 ~ 16649574 (+)
G150686 NA non-coding upstream 549562 16645128 ~ 16646915 (+)
G150642 NA non-coding upstream 1005456 16190820 ~ 16191021 (+)
G150563 NA non-coding upstream 1577451 15615130 ~ 15619026 (+)
G150831 NA non-coding downstream 153723 17655576 ~ 17702341 (+)
G150877 NA non-coding downstream 367445 17869298 ~ 17870290 (+)
G150886 NA non-coding downstream 448081 17949934 ~ 17971252 (+)
G150909 NA non-coding downstream 472472 17974325 ~ 17974800 (+)
G150913 NA non-coding downstream 492706 17994559 ~ 18063346 (+)
G150750 NA other upstream 258195 16935993 ~ 16938282 (+)
AMCG00000514 NA other upstream 382112 16811453 ~ 16814365 (+)
AMCG00000443 esrrb,LOC106611051,LOC101473368,LOC100708924 other upstream 2252077 14931778 ~ 14944400 (+)
AMCG00000412 pgf,LOC102799665,LOC102204058,LOC106593515,LOC106611025 other upstream 3042637 14133138 ~ 14153840 (+)
G150069 NA other upstream 3503888 13690839 ~ 13692589 (+)
G150811 NA other downstream 43601 17545454 ~ 17548508 (+)
AMCG00000525 NA other downstream 246657 17748510 ~ 17759582 (+)
G150976 NA other downstream 652011 18153864 ~ 18159321 (+)
AMCG00000550 NA other downstream 909590 18411443 ~ 18419576 (+)
AMCG00000573 NA other downstream 987998 18489851 ~ 18530757 (+)

Expression


Co-expression Network