G150831


Basic Information

Item Value
gene id G150831
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 17655576 ~ 17702341 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU189824
TACAACAGTGGCTAACTTCGGCGTCTCATGAAGGAGGATGAAAGCAGCAGCTTCCTCCTCACAGCTGCATACTGCGCAGCGGACTCGGAGTAAACTTGAGGAAGTGTCAGAGCTGATGCGCTCACTTCTGTGGTAAACACTTTGTCAGAAGAATTCACACTTTTTACTTGATCACTGCGCTACACTACTTCATACACCGGTGTCAAAAAGTCAAGAGAAGCATTCTGGAAGCCAGGTCCTAAGACGCTAGATAGGAGATGATTGTTTAGCAagatattaaattgtttttattcaatataattgtcaaattacaaattattttttttttGTTTCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU189824 True 336 lncRNA 0.40 2 17655576 17702341

Neighbor

gene id symbol gene type direction distance location
AMCG00000530 NA coding upstream 116167 17529717 ~ 17539409 (+)
AMCG00000506 LOC107680771 coding upstream 225079 17427522 ~ 17430497 (+)
AMCG00000507 NA coding upstream 255229 17377382 ~ 17400347 (+)
AMCG00000505 NA coding upstream 299753 17340772 ~ 17355823 (+)
AMCG00000509 nrxn3 coding upstream 401951 17211968 ~ 17253625 (+)
AMCG00000526 NA coding downstream 17308 17719649 ~ 17748022 (+)
AMCG00000527 psmc1b,psmc1 coding downstream 58362 17760703 ~ 17768088 (+)
AMCG00000520 LOC107670363,LOC107724957,LOC105896953 coding downstream 93007 17795348 ~ 17800754 (+)
AMCG00000542 ralgapa1,LOC107589631,LOC107693153,LOC107725466,LOC107586611 coding downstream 181488 17883829 ~ 17938428 (+)
AMCG00000543 NA coding downstream 256463 17958804 ~ 17962974 (+)
G150767 NA non-coding upstream 153723 17196477 ~ 17501853 (+)
G150689 NA non-coding upstream 932949 16681915 ~ 16722627 (+)
G150687 NA non-coding upstream 1006002 16647905 ~ 16649574 (+)
G150686 NA non-coding upstream 1008661 16645128 ~ 16646915 (+)
G150642 NA non-coding upstream 1464555 16190820 ~ 16191021 (+)
G150877 NA non-coding downstream 166957 17869298 ~ 17870290 (+)
G150886 NA non-coding downstream 247593 17949934 ~ 17971252 (+)
G150909 NA non-coding downstream 271984 17974325 ~ 17974800 (+)
G150913 NA non-coding downstream 292218 17994559 ~ 18063346 (+)
G150951 NA non-coding downstream 375773 18078114 ~ 18081341 (+)
G150811 NA other upstream 107068 17545454 ~ 17548508 (+)
G150750 NA other upstream 717294 16935993 ~ 16938282 (+)
AMCG00000514 NA other upstream 841211 16811453 ~ 16814365 (+)
AMCG00000443 esrrb,LOC106611051,LOC101473368,LOC100708924 other upstream 2711176 14931778 ~ 14944400 (+)
AMCG00000412 pgf,LOC102799665,LOC102204058,LOC106593515,LOC106611025 other upstream 3501736 14133138 ~ 14153840 (+)
AMCG00000525 NA other downstream 46169 17748510 ~ 17759582 (+)
G150976 NA other downstream 451523 18153864 ~ 18159321 (+)
AMCG00000550 NA other downstream 709102 18411443 ~ 18419576 (+)
AMCG00000573 NA other downstream 787510 18489851 ~ 18530757 (+)
AMCG00000572 mnat1,LOC107757134,LOC107675563 other downstream 832128 18534469 ~ 18565627 (+)

Expression


Co-expression Network