G151050


Basic Information

Item Value
gene id G151050
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 18359247 ~ 18360292 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU190134
GAGGGGCGGTGTGGAGGAGCCGGGGCTGTCGTCCTCGGGCTCGGACAGGGTGACAGTGGGCACGCCCTCCAGCCCCAGGCTCAGGATGCTCTCCTTCTCCGACACGGCGACGGGCGGCGCGGGGGGCGGGGGCACGGCGCTGCTCTGGGTCAGCGTGATGCGCACCGGGCTGGCGGTCAGCGGCGTGCCCAGGCTGCGGTACGACTGGTAGTCAGACAGCTCCTCGTCCGACGGGTCCTCCACGTAGGGGAAAGCCTGCTCGTCCAGCGCCGCACCCAGCGTCTCCGCCGGCGCCACGGCCTCCAGGGGCTTGGGGGGGGTCTTGTCGGAGTAGTCACCGAGGTTCGATAGCAtgtctgggggggtgggggtgccaTTGCCACCCATCCCCGTCGTCCAGCTCTCTGGCGACGTCTCGTGCGGAGGCTGCTGGGGCAGCGGCCCCCTCGGACCCTCGGAGCTGCTGATGTCCAGGTAGTTGTAAGGCTCCATCTTCTCCGACTCAAGGATGAGGTTCTTGGCCACGTCGATGGACTCCCCAGGGGTCATCTCGATGCCCGAGTCTGAGCTGAACATGCCGTGCGACTCCAGGCTGGGGATGCGGTCGCGGGTCTCCGTTTTGGACTCTGCGTGTTTCAGTTTCAGCGCTGGCTCGTCCTCCTCCTGCTGCCGATTCCCCGGGCCCTCGGGCAGCGGTAGCTCCCCGGAGAAGTAGGACGTGTCGGGCTGGAAGGCGAAGCTCTGGCCGGACAGCAGGGAGGTGTAGAGGTCAGCATCGTCACCGCCCACCGACTTCTGGAGTAGGCTGTCCCCACTGCCTGGAAAGAGACAATGgacaggggacaggggacaggTCAGCAGTGTTCAGGCAATGTGGATCAGCACATAGAGGACTAGAGGACTAAATCCCTGGACAGCAGGTGAACAGAGCCCGGAAAGATGGCAGATGTGACAAGGGAAGAAAACAGACATCCCCCTCAAGTAAGAACAAATCCCAAAAGAGAAAGGAGCGCTGTATAAGGCAATGCACACGTTTTTGATTCCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU190134 True 1046 lncRNA 0.64 1 18359247 18360292

Neighbor

gene id symbol gene type direction distance location
AMCG00000555 LOC104966444 coding upstream 22800 18308336 ~ 18336447 (+)
AMCG00000562 zfyve21,LOC106610961 coding upstream 107583 18245088 ~ 18251664 (+)
AMCG00000563 klc1 coding upstream 118305 18222486 ~ 18240942 (+)
AMCG00000561 NA coding upstream 154267 18201482 ~ 18204980 (+)
AMCG00000545 LOC104965446 coding upstream 183031 18161502 ~ 18176216 (+)
AMCG00000551 NA coding downstream 32124 18392416 ~ 18404797 (+)
AMCG00000552 ppm1a,LOC106610975 coding downstream 68623 18428915 ~ 18433601 (+)
AMCG00000553 six6,six6a,LOC107743981,LOC106598791,LOC107588601 coding downstream 120079 18480371 ~ 18483206 (+)
AMCG00000571 NA coding downstream 208873 18569165 ~ 18583738 (+)
AMCG00000579 prkch,LOC100380676,LOC107675581,LOC107548619 coding downstream 242258 18602550 ~ 18606788 (+)
G150953 NA non-coding upstream 274560 18084460 ~ 18084687 (+)
G150951 NA non-coding upstream 277906 18078114 ~ 18081341 (+)
G150913 NA non-coding upstream 295901 17994559 ~ 18063346 (+)
G150909 NA non-coding upstream 384447 17974325 ~ 17974800 (+)
G150886 NA non-coding upstream 387995 17949934 ~ 17971252 (+)
G151052 NA non-coding downstream 24308 18384600 ~ 18385046 (+)
G151217 NA non-coding downstream 498971 18859263 ~ 18859464 (+)
G151219 NA non-coding downstream 502732 18863024 ~ 18868044 (+)
G151226 NA non-coding downstream 559629 18919921 ~ 18921366 (+)
G151310 NA non-coding downstream 770333 19130625 ~ 19130890 (+)
G150976 NA other upstream 199926 18153864 ~ 18159321 (+)
AMCG00000525 NA other upstream 599665 17748510 ~ 17759582 (+)
G150811 NA other upstream 810739 17545454 ~ 17548508 (+)
G150750 NA other upstream 1420965 16935993 ~ 16938282 (+)
AMCG00000514 NA other upstream 1544882 16811453 ~ 16814365 (+)
AMCG00000550 NA other downstream 51151 18411443 ~ 18419576 (+)
AMCG00000573 NA other downstream 129559 18489851 ~ 18530757 (+)
AMCG00000572 mnat1,LOC107757134,LOC107675563 other downstream 174177 18534469 ~ 18565627 (+)
G151522 gpr135,LOC107564991 other downstream 1609047 19969339 ~ 19972015 (+)
G151676 NA other downstream 2481646 20841938 ~ 20843463 (+)

Expression


Co-expression Network