G151310


Basic Information

Item Value
gene id G151310
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 19130625 ~ 19130890 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU190511
CCTCGGTATCCAGAACCCCAGACTTGGCCTCATCGAGAAAGTGGACAGACGCCTACTGGTCTCTTCCTGTCTCGGTGGCTGCTCCGTGGGTTGGGACTGAAGaaagtgaagagagagagagacagaaagaggaaGAAGGGCACCCACAGTACCTGTTCGACAGGCAGTGTCACTGAGCTCAGAGAGGTGTGACATCATCGCACGCATCACCCAAGCTTATCGGCAAACCCAGGTGCTGCTTCGTCCcgcaggaggaggagaagacg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU190511 True 266 lncRNA 0.56 1 19130625 19130890

Neighbor

gene id symbol gene type direction distance location
AMCG00000595 NA coding upstream 139308 18950158 ~ 18991317 (+)
AMCG00000596 NA coding upstream 183159 18928666 ~ 18947466 (+)
AMCG00000594 NA coding upstream 207600 18886448 ~ 18923025 (+)
AMCG00000587 rhoj,LOC107707080,LOC108257930,LOC107701469,LOC107743974 coding upstream 305947 18808614 ~ 18824678 (+)
AMCG00000569 NA coding upstream 440530 18678797 ~ 18690095 (+)
AMCG00000593 btbd6,btbd6b,LOC107718408,LOC106571711,LOC107701487,LOC107560384,LOC107755235 coding downstream 156283 19287173 ~ 19289424 (+)
AMCG00000605 srp54,LOC107729255,LOC107693187 coding downstream 252042 19382932 ~ 19387617 (+)
AMCG00000604 sec23a,LOC107689296,LOC107589610 coding downstream 260884 19391774 ~ 19409778 (+)
AMCG00000606 NA coding downstream 288898 19419788 ~ 19444709 (+)
AMCG00000610 NA coding downstream 336577 19467467 ~ 19470302 (+)
G151226 NA non-coding upstream 209259 18919921 ~ 18921366 (+)
G151219 NA non-coding upstream 262581 18863024 ~ 18868044 (+)
G151217 NA non-coding upstream 271161 18859263 ~ 18859464 (+)
G151052 NA non-coding upstream 745579 18384600 ~ 18385046 (+)
G151050 NA non-coding upstream 770333 18359247 ~ 18360292 (+)
G151339 NA non-coding downstream 174356 19305246 ~ 19307462 (+)
G151535 NA non-coding downstream 918526 20049416 ~ 20049648 (+)
G151538 NA non-coding downstream 985608 20116498 ~ 20116788 (+)
G151540 LOC103376870 non-coding downstream 1022225 20153115 ~ 20153540 (+)
G151557 NA non-coding downstream 1408182 20539072 ~ 20602476 (+)
AMCG00000572 mnat1,LOC107757134,LOC107675563 other upstream 564998 18534469 ~ 18565627 (+)
AMCG00000573 NA other upstream 599868 18489851 ~ 18530757 (+)
AMCG00000550 NA other upstream 711049 18411443 ~ 18419576 (+)
G150976 NA other upstream 971304 18153864 ~ 18159321 (+)
AMCG00000525 NA other upstream 1371043 17748510 ~ 17759582 (+)
G151522 gpr135,LOC107564991 other downstream 838449 19969339 ~ 19972015 (+)
G151676 NA other downstream 1711048 20841938 ~ 20843463 (+)
AMCG00000661 NA other downstream 2395980 21526870 ~ 21533538 (+)

Expression


Co-expression Network