G151676


Basic Information

Item Value
gene id G151676
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 20841938 ~ 20843463 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU190974
CTACAGCAGGAAAGGTCCTGTACAATCCTGAAGATGAACCAAAACGTCATTAACTTATGAGCAAATATTATTCGTTAATCTTCCATACTGGTGCTTTAAACTCTGGCCTGAAACACAGATACCCCGATCAGGGCCGATTCACTTAtcactgccccccacccccacctggCAGACAGCAGTCATTCAAAGTGGAACTCCTTTAGGTTCCCCTTTAATATCGTGTTTTATATCGATTTATCAGGTATCATGTCAATCGAGTTGCATGATGCGACTTTAGCTCAACAGCAACCTAAACAATCACCTCCCAGAGCATTATGCTCTTCTCGTTTCCGATTTAAACAGCCCTTCTGCTCACCTTCGTGTCTTCTGGTCCTGACAACGGTGCCGATTCTGTGGCTGTTGCGATAACAGTCTCTGCCGTAACACCGGGCCCCGCCTTGGGCCTCTCGCTATCTGCGGTCTGTGGTGCCGTGACCGGCGTCAGCGCGGCCCGTCCATCTGTCTGCGGGGCCGTGACCGTGGTGGTGCCCCCTGCCGAGAGAACTGCTCCGGACCCCACAGCAGGGCCCCTGACCTCCTGGTTTACGGGGCCCCCCGAGCCGGGCCCCTTCTCTCCGTGTGCGGGATTGAGCCTGTAGTGTCTGGACAGGCCCCCCCGCCCGATGTAGGCCTTCTCGCACGTCTCGCACTTGAAGGCCTTGGGGTTGAGGTTAAAGTTAATGGCCCCCGTGTCGCCACCGCGCTCCCCCGGCCCCCCGGCCactctgtcctcctcctcctcctcctcctccacgcTGATCTCAGAGTAGTCGTCCGAGTCAGAGGGGTGGCCGTCGGCCAGGTCCTCCCTCTTGATGAACTTGTAGTCCTTGACCTTGTACTTGGGCGGGCGGGAGATCCGACCCGAGCGCGTCTTGATCTTCTGTGGCTTCTTCTCACGCTCCTTCTCCTTCTGCCTCTCCTTCCGGTCCAGCGCCCCCGAGACAGACCCCGAGCCTGGGGCGCCAGACACCACGGCCACCCCCCCGCCCTTCCCCGGTCTCCCGTTCAGCGACGGCTTGGCGGGCAGCCTACGTGGTGCGGTGGAGGCGCCCTCCGCCGTTGGCACCCGCCTCTGCACCAGCAGCTGGATGGGGGGCTCGCCAGAGCCGCTGTGCAAGAAGaactgctgctgttgctgcgaTTGCTGCGGCCCCCCAGTTCCGGGGAAGGGCTGGATACGGATGATCTGGGGGCTGCCGATGCTGAGTGCCGGCGATACGCTGACCCGGGTGGTGGACTGGCTCACCGCCGAGACACTCCTCTGCTGGAACATGGCAAGGGGTGGCATGGGCCGCTCTGGGGGCTCCGGGGCCGAGAGGTTCTTCACCTGGATGCGGATGGTCTCCAGCTGCTGGGGGAGAAGATGGGAGCGTCTTGAGGAGGAACAGCAGGGGTCATTCAATAGCATCAACAAGTCCACAGGCCTGACCGTAAACACGCCACACTGCCGGACTGTCACTGGTGTGTTGTCAACAAACTcaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU190974 True 1526 TUCP 0.60 1 20841938 20843463

Neighbor

gene id symbol gene type direction distance location
AMCG00000643 NA coding upstream 3658 20836579 ~ 20838280 (+)
AMCG00000648 NA coding upstream 31912 20809157 ~ 20810026 (+)
AMCG00000634 cdc42bpb,LOC107684799 coding upstream 107734 20703688 ~ 20734204 (+)
AMCG00000637 NA coding upstream 147647 20686085 ~ 20694291 (+)
AMCG00000626 NA coding upstream 271015 20550059 ~ 20570923 (+)
AMCG00000642 ehd4,LOC107733091,LOC108430677,LOC105023592 coding downstream 11628 20855091 ~ 20869738 (+)
AMCG00000650 NA coding downstream 35856 20879319 ~ 20917145 (+)
AMCG00000654 NA coding downstream 77255 20920718 ~ 20921397 (+)
AMCG00000641 foxg1,LOC106611199 coding downstream 395250 21238713 ~ 21239930 (+)
AMCG00000649 NA coding downstream 626380 21469843 ~ 21477418 (+)
G151675 NA non-coding upstream 446 20841255 ~ 20841492 (+)
G151661 NA non-coding upstream 29648 20811450 ~ 20812290 (+)
G151557 NA non-coding upstream 239462 20539072 ~ 20602476 (+)
G151540 LOC103376870 non-coding upstream 688398 20153115 ~ 20153540 (+)
G151538 NA non-coding upstream 725150 20116498 ~ 20116788 (+)
G151702 NA non-coding downstream 26721 20870184 ~ 20870411 (+)
G151706 NA non-coding downstream 73687 20917150 ~ 20917870 (+)
G151708 NA non-coding downstream 74479 20917942 ~ 20918538 (+)
G151709 NA non-coding downstream 75236 20918699 ~ 20919400 (+)
G151752 NA non-coding downstream 297723 21141186 ~ 21141460 (+)
G151522 gpr135,LOC107564991 other upstream 869923 19969339 ~ 19972015 (+)
AMCG00000572 mnat1,LOC107757134,LOC107675563 other upstream 2276311 18534469 ~ 18565627 (+)
AMCG00000573 NA other upstream 2311181 18489851 ~ 18530757 (+)
AMCG00000550 NA other upstream 2422362 18411443 ~ 18419576 (+)
G150976 NA other upstream 2682617 18153864 ~ 18159321 (+)
AMCG00000661 NA other downstream 683407 21526870 ~ 21533538 (+)

Expression


Co-expression Network