G151752


Basic Information

Item Value
gene id G151752
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 21141186 ~ 21141460 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU191062
cagccataacattatgagcactgacaggtgaagtgaatgacactgataatctcgtgatcatggcacctgtcagtgggtgggatatattaggaagcaagtgaacattttgtcctcaaagttgatgtgttagaagcaggaaaaatgggcagcgtaaggatctgagcgactttgacaaggaccacattgtgatggctagacgactgggtcagagcatctccaaaactgcagctcttgtggggtgttcccggtctgcagtggtcagtacctatcaaaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191062 True 275 lncRNA 0.47 1 21141186 21141460

Neighbor

gene id symbol gene type direction distance location
AMCG00000654 NA coding upstream 219789 20920718 ~ 20921397 (+)
AMCG00000650 NA coding upstream 224041 20879319 ~ 20917145 (+)
AMCG00000642 ehd4,LOC107733091,LOC108430677,LOC105023592 coding upstream 271448 20855091 ~ 20869738 (+)
AMCG00000643 NA coding upstream 302906 20836579 ~ 20838280 (+)
AMCG00000648 NA coding upstream 331160 20809157 ~ 20810026 (+)
AMCG00000641 foxg1,LOC106611199 coding downstream 97253 21238713 ~ 21239930 (+)
AMCG00000649 NA coding downstream 328383 21469843 ~ 21477418 (+)
AMCG00000657 scfd1,LOC107697716,LOC107719485 coding downstream 336459 21477919 ~ 21507190 (+)
AMCG00000658 NA coding downstream 367914 21509374 ~ 21514322 (+)
AMCG00000659 NA coding downstream 375182 21516642 ~ 21526478 (+)
G151709 NA non-coding upstream 221786 20918699 ~ 20919400 (+)
G151708 NA non-coding upstream 222648 20917942 ~ 20918538 (+)
G151706 NA non-coding upstream 223316 20917150 ~ 20917870 (+)
G151702 NA non-coding upstream 270775 20870184 ~ 20870411 (+)
G151675 NA non-coding upstream 299694 20841255 ~ 20841492 (+)
G151775 ap4s1 non-coding downstream 346272 21487732 ~ 21567174 (+)
G151782 strn3,LOC106611207,LOC107590905 non-coding downstream 394771 21536231 ~ 21542398 (+)
G151804 NA non-coding downstream 454378 21595838 ~ 21598156 (+)
G151676 NA other upstream 297723 20841938 ~ 20843463 (+)
G151522 gpr135,LOC107564991 other upstream 1169171 19969339 ~ 19972015 (+)
AMCG00000572 mnat1,LOC107757134,LOC107675563 other upstream 2575559 18534469 ~ 18565627 (+)
AMCG00000573 NA other upstream 2610429 18489851 ~ 18530757 (+)
AMCG00000550 NA other upstream 2721610 18411443 ~ 18419576 (+)
AMCG00000661 NA other downstream 385410 21526870 ~ 21533538 (+)

Expression


Co-expression Network