AMCG00000680


Basic Information

Item Value
gene id AMCG00000680
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 21907 ~ 26281 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000680
ATGACGGGGGCCGGGGCCTGCCTCGGGCAGCTTTGCCAGAGCAGGGCATCAGCCTGGGGGCGACTGCTGAAGGCTCCTGCTTCTGCTTTGGAGGGGTTAACCAGGTTCGAGAGCAGTGCAGGCATGCTGACGTTGGCAGGGAAGCTGAAGCGTGACGAGGGGATGAAGGCCGGCCGCAGCTCCAGCGGCTCCTCTGACTCGGCCCACCGCGTGTCCATCCGCGACCGGCTTCTGATCAAAGGTATGCTGTCGTCGCCGAAGTCGCTCTCTCCACGGGATGAACTGTGTGGTGCAGGGCAGGGTAGGACACTAGGGCGGAGCTCCTCTCCTCCGCCCTCAGCTCAGTCAGGGTAA

Function

GO:

id name namespace
GO:0045116 protein neddylation biological_process
GO:0019788 NEDD8 transferase activity molecular_function
GO:0005524 ATP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000680 True 354 mRNA 0.64 2 21907 26281

Neighbor

gene id symbol gene type direction distance location
AMCG00000681 NA coding downstream 12471 38752 ~ 40596 (+)
AMCG00000683 unc80 coding downstream 111824 138105 ~ 143895 (+)
AMCG00000694 NA coding downstream 341295 367576 ~ 414428 (+)
AMCG00000695 cps1 coding downstream 388163 414444 ~ 414795 (+)
AMCG00000702 vwc2l coding downstream 1085600 1111881 ~ 1133185 (+)
G125484 NA non-coding downstream 64762 91043 ~ 91285 (+)
G125485 NA non-coding downstream 66002 92283 ~ 92620 (+)
G125510 pofut2 non-coding downstream 89830 116111 ~ 117302 (+)
G125516 NA non-coding downstream 102578 128859 ~ 129127 (+)
G125565 NA non-coding downstream 328207 354488 ~ 355729 (+)
G125561 NA other downstream 313359 339640 ~ 403591 (+)
AMCG00000723 crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 other downstream 1573415 1599696 ~ 1606031 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other downstream 1642564 1668845 ~ 1698573 (+)
AMCG00000734 NA other downstream 1779126 1805407 ~ 1814157 (+)
AMCG00000848 NA other downstream 5435020 5461301 ~ 5465981 (+)

Expression


Co-expression Network