AMCG00000690


Basic Information

Item Value
gene id AMCG00000690
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 307481 ~ 329049 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000690
ATGTTGGCTCCAGCGCTGAAGACGCGGTCGTCTTTGAAACGCACTGGAGATGGGAGCCGGAATGGCGGCGCACAGGACACAGTTTCCGCACAGAGACACGTCATTGTGGCGCCACGCCCCGGCCACGCCCCCCGCCTGTGTCGCTGCTGCCGGGCCGCGCTGGCGGCAGTTGGAGTCGGACGGCGCCGAGACGGGAGGCGGGGAGACGGGCTGCACTTCCCGCTGTTAGCGTTTCTTTTCCCACATTTCTGTGGCCGGATCAGTGGTCGTTTGTCCCCTGAATGCCGCAGGATCCCCGCCGTGTCCGCCGTGAGGAGCGCTGTGCATGCAGACGTGTGGGCAGCTCCGGGCGCACGCTGAGGACACGGGACAGAGAGCATGGCTCCGGCGCTGACGGAGACGGCCACCGACGGACACGGGGTCCACTTGTCGTCTCCGCTGCCCTCTAGCACCATCAACGCCGACTCCGCCATGCTGGGGAAAGAGCCGGACGCCCAGCCGAAGCCGGCGGGGGATGGCACCGCACAGTCCGCCTGGCTCGACCGCAGCTTCCTGCGCTCCTCGGCCGTGTGTTCCCAGGAGGCTGCGGGGCTGGAGGACGCTGCCTATGTCTCCCCTGTGGCACCGGCCCCCGGGCTTTACAAATCGGTGCTCTCAAGCTCCAGCTCTCTGTTAAATATCCTCTCGCTCAACACAAACCGCAGTGTGGCAAAAACCCCAGCGCCGGCCTGGCCCAGAGGCCCCCACAAGGATCTCTTCAACCATTCTGGCGTTTTCCTCCTCTCGATATCCGAACGCAAGCGAAAGGGCGAGGCGGAGTGCGGTGAGAAGCCGAGCCCCCGCCCCGGCAGTGGCGCGAGGTCCGGCGCTGAGGGTGTGGTGAACCCGGTGAACAGGCTGAGCGACAGCGACTCGTCAGCCGGGGATCAAGCAGATAATGATATCCTGACGCCGACCAAAATAAACGGGTCTCTGGCGAGGGCCTTGCGCAGCAGCACGGCCAGAACCGGCTCCCCTGCCCCGCCCTGGGATCTGTGTGAGCCCGGCAGTCTACTGCTCACCGGCCGCGCAGCTGGGGAGGAAGCCAGAGCTAACGGCCagctgtgtcagtgcctcacCAAACACCGGACTCTGGTAAGTCGCGCCGGCGAGATACAGAAACGCCTGCAGACTCTTCTCGGGGAGCACGTAGCGCAGCACTGCAGTAAACAGCTTGAAGCGCTGCGAGAGCATCACTTCACAACGAGCCCGCCTGCCGCTGAGCGCACTTGTAGCCCTGTGGATAGGAGCTCCTTTGATCTGTCTGAGGCAGAGACGGGTCTGTGCGCAGGCATCGGCCGCCCCCACGCCGAGCCGAAGCCGGCCATGTTCTCCGGCTGCGTGTCAGAGGTCCGCAAGTTCGCCCGCTGTGCCAGAGCAGCGCTGTCGGGGGTCACCGAGATGCTGGACCCAGACGCCACGGACAGCAGCTCAGATGAAGAGTGGGACCCAGACCTGAAGCCGGGGGCAGAGACGGTGCCAGTTCCTCGCGGTTGCGAATGGAGATGGCTGACAGACAGGGCAGAGATCGGCAGCCGCTGGACGTGGCTTCAGGCCCGGGTGTCTGAGCTGGAATTTAAAATCCAGCAGCTCACTGACCTCCACAGACACCTGCACTCCACAAAGGGGAGAGTCATTCTGGCTGATTCGCAGCCCCTAACTGACAGGCTGGTTCAGCAGATGCTGTTGACAGAAAGCCCAGGTCTGCCCCGCGCTGCCAGAGACAACCGGACCCCTGCCGGGCCAAAGGATTGGTCCTCAGAGCGAGATTATGAAATGGAGCCGAGCAGCCCGACTCTCCTTCTGAGAAACATCGAGAGACAGAGCGCCCAGCTAACAGAAATCGTCAACAGCCTGATGCCTCCCTTCGGTTTCTCGCCCTCCTCCTCTCCGCTCTCAAAGCCCTGTAAATGGAAAGGACCGGCCGAGGCGGGCCCTCGCAGTGAACTGGGAGGCGGAGACGTGTTCTTCCGTGGCGGCACACGTGTGGCCCCTGAGCACCCAGCGAAGAAGAGGAGGGTCTGTAAGAAGAGTGCAAAGGCCCCGCACGTGAGCCATGCATGTGTGTCGGCGAGGACGCGGCCTCTGCGCACCTACCTCAAGCGCCGCCTCTTTGTGCTGGACGTGCCTCGCCAGGGGCTGTGCTtgagctcctccagctccaggGGGTCCGTGAGGGGGGGACTGATGGCGGCCGAGCTGGAGGCGTCGCTGCACCCCGTCCTGTCACTCGCCTCAGAtgttcctcttcctctccatcTCCAGACCGTCCTGCAAGGTGAAGACTGGGTGAACCAGCCGGTTCTGCCGTATCCGGGCGGGTCAGAGGAGGCCAGCTCTCCAGAGTTTGCCGGCGCTGGGCATCCGCTGGCAGATGACGCAGCCCTGTCTGATTGTACCCCTGCTGAAGAACATCGGGATTTACCTCCCGCCGGTCTGGGGACGTCTTGGCCGCTGGGACGAGGGGCCAAGAAGAGGAGGCGTGCCAGCGAGGCAGTGGAGGAGGAAGATCAGCCCCTGTCTCCGCTGATGGACGCCTCCTAttccctcccccccactccTGACGACAGCCCCTCGGACTTCGCTGCACCCAGAGCCGCGCAGGGATCCCGGCAGGCCGCACAGAGCTCGGCCAGGAGGCGTCTGCGCAGCGACTGTTTCTACGACATCGACGACATCGTCATCCCCGTGGCCCTGGCGGCCCCCGCGAAAGTGGAGCGGCTGCAGTACAGGGACATTCTCACCCCCAGCTGGCGTGTTGTTGACATGCAGGCGTCGGAGGGGAGGCTGGGCGACGCGCAGGAGTGTGAAGACATGTCAGACGAGGCGTTTCTGGGCCGGCATGTGATCTgtgagaagaaggagagagtgaagTGGCGCTTCTGGGACCAGAACCGGTGTcagaggaggagcagcagGGGCTCCAGCAGGAGCGCAGACGGCCCCCCGAGTGCTAACCCGCCGGACTGGGACTGCGAGGGCCGGACCGAGCCGCCCCCAGGAGAGCGAGAGGACTGGGCCTGGCCGGACCGCACACCCTGGGAGCGGAGGGCGTTTCCCCTGCAGCAGTGTGAGATGGAGGCCCTGCGCCCGGCGGAAGAGCAGTGGCCCCCTGCCTGCCCCCTCGGTGCGGGCCCCCTCTCCGGGACACCCCCGGTGGGGGACTCAGTGCTGCACACAGCGCAGGCACGCTGCTCGGGGAGCTGACAGTCGCTGGCGCTGACGTCTGGGATCTCAGAGCGCAGAATCCCATGGGGCTGCAGGACAGCGGAAGAGGGCCGTCTGGAGCCGGAGGGACGCAGAGGCAGTGAGGCCGGTGAGGCCAGTATGTTCTCACACGGACTCACTCTCCATGTGAAGAGTTTGGAATGCTCTCTCGCACCGGCGGCCGGCCTTGTTGGTCAGAGACGGTTTGGAGGGGCCTCTCAGGGGTGTGACCTCGTCTGCAGCGGTGGTGTTAGTGTCGTTGTTAGTGAAGCCTTTTCACAGAGTGTCAGTGTTGTTCGCTGCACAGAGCTTCGTCTCGACGGCCCGTTCCTTCACCGAGGAGAGAGAGGGCTTTGTGCAGCAGACGGGCCGGGACAGAGGTGTCGGCAGCATCCAAAACCATCCCGAAACCCAAATCACTGACCTCGGTACAGGAACACCTTTACACTGGTAATAACCGTAACAGCAACACTTGTTTGTCAGAGAGCTGCGCGGTTCTGTTGGCTcgtgggaaaacaaaacaacaacaacaaacacaacttcAGAGATCAGTTTCTTTTCAGTTCAATTTACACAAATTCAACAATATTATTCTGTCAAACAGAGTcgtagtttttttaaataaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000690 True 3873 mRNA 0.63 16 307481 329049

Neighbor

gene id symbol gene type direction distance location
AMCG00000688 unc80 coding downstream 115153 145779 ~ 192328 (-)
AMCG00000689 NA coding downstream 164972 131633 ~ 142509 (-)
AMCG00000686 pofut2,LOC107741944,LOC107660604,LOC107565035,LOC107714363 coding downstream 187583 112162 ~ 119898 (-)
AMCG00000684 NA coding downstream 196957 100069 ~ 110524 (-)
AMCG00000685 NA coding downstream 217236 87659 ~ 90245 (-)
AMCG00000692 acadl coding upstream 3174 332223 ~ 338261 (-)
AMCG00000693 NA coding upstream 10684 339733 ~ 348410 (-)
AMCG00000691 NA coding upstream 25439 354488 ~ 366116 (-)
AMCG00000696 erbb4,LOC107741926,LOC107555909,LOC107660610,LOC107662043,LOC107721020 coding upstream 201992 531041 ~ 536858 (-)
AMCG00000697 NA coding upstream 213007 542056 ~ 544156 (-)
G125515 NA non-coding downstream 179818 121280 ~ 127663 (-)
G125498 NA non-coding downstream 214826 92283 ~ 92655 (-)
G125497 NA non-coding downstream 216196 91051 ~ 91285 (-)
G125578 NA non-coding upstream 46771 375820 ~ 376770 (-)
G125591 NA non-coding upstream 80566 409615 ~ 410817 (-)
G125622 NA non-coding upstream 194472 523521 ~ 527501 (-)
G125625 NA non-coding upstream 268935 597984 ~ 598335 (-)
G125642 NA non-coding upstream 558105 887154 ~ 887476 (-)
AMCG00000687 map2 other downstream 63304 194644 ~ 244177 (-)
AMCG00000710 myo1b other upstream 978772 1307821 ~ 1312408 (-)
G125814 NA other upstream 1057794 1386843 ~ 1422410 (-)
AMCG00000719 NA other upstream 1149691 1478740 ~ 1500661 (-)
AMCG00000731 NA other upstream 1432980 1762029 ~ 1771025 (-)
AMCG00000741 gtf3c3,LOC104966512 other upstream 1500495 1829544 ~ 1831310 (-)

Expression


Co-expression Network