AMCG00000691


Basic Information

Item Value
gene id AMCG00000691
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 354488 ~ 366116 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000691
cccacatTAAGGGCTGAGGCTCTACTGGGGCATCACTGTGCGTTCAGAGCCATCAGACTGCACAATCTGCCGGCGCATACAGAGGTAAATACCCCGGGGGTAAACACTGGGGTAAACGAGCCAGAGCTGCACGGCACTGACGCAGCTGCGCACTTTGCAGACGCTCCCTGGATCGACGCGGCCGCGCTGGCAGATCTGGGAGACGCGAGGGCGAGTTTGCAGACGCTCCCTGGGACCGACGTGGCTGTGACTGTTGTCTGCGCGGAGAACCGGAGCCACGGCAGCGAGAGACTGAGAGATCCGAGCAGCTCGACCTCCCACGACGACCCCCACCAGCGGAACACTAGGCCTCGCCGCGCCGCCTTTGGCAGCTGCTCTcagggcagcagcagcatctcCTCGGCGCGCCGCTAGTCCGGATCGAGCCGCCCCCGTCCCGCCCGTGTCGCACCCAGAGCCCGGGCCGCCCCCCGCGGGAGCAGCATGGAGCAGAGAGCCGTGAAGAACCCGTACCGGGACTACGACGGCACCCCGGCCTGCACGCAGGGGCTGTTCGACCACCAGGGCCGGCTGACCCCAGATTTCGCCGGCCGGCTGAGCAGCAAGATCGGAGAGCTGATGGCGCTGATGGAGAGCGGGCTGAAGTCCGCGGACCCGGCCGACTGCACCACCTACACCGGCTGGGCAGgCATCGCGCTGCTCTACCTGCACCTGTACAACGTGTACGGAGAGCCCTCCTACCTGCAGCGGGCGCTGGAGCACGTGAACCGCAGTCTGCGCTGCCTGACGCGCCGCTGGGTCACCTTCCTGTGCGGCGACGCCGGGCCGCTGGCCGTGGCTGCGGTGGTTTACCACAAACTGCACCGCGAGCAGGAAGCCGACGACTGCCTGAGCCAGCTGCTGCGGCTGCACCAGTCGGTCGTCCAGGGCGACTCCCGGCTGCCGGACGAGCTGCTGTACGGCAGGGTGGGCTACCTGTACGCGCTGGTGTTCGTCAACCAGCAGTTTGAGCAGGAGAAGATCCCCATGCAGTACGTCCAGCAGGTCTGCGATGCGGTCCTGGCCTCCGGAGAGGGACTGTCCAGAAGGAGCCGGCACCAGGACACCAGCCCCCTGCTGTTCGAGTGGTACCAGGAATACTACGTGGGCGCGGCGCACGGCCTGGCCGGCATCTACTACTACATGATGCAGcCGGGCTTCGGCGTGGGTGATGAGCGTCTGCTCCGGCTGCTCAAGCCCAGCGTGGACTACGTGTTCCAGCTGCGCCTGCCCTCGGGGAACTACCCCCCCTGCATCGGCGACTCACGCGACCTGCTGGTGCACTGGTGCCACGGCTCACCCGGGGTCATCTACATGCTCATCCAGGCCTACAAGGTGTTCGGGGGGGAGCACTACCTGGCCGGCGCGATGCAGTGTGGAGAGGTGGTCTGGCAGAGGGGGCTGCTGAAGAAGGGCTACGGTCTGTGCCACGGCGCGGCCGGCAACGCCTACAGCTTCCTGGCGCTGTACAAGCTGACCCACGACCCCAAATACCTGTACCGAGCCTGCATGTTCGCAGTGTGGTGTCTGGACTACGGCAAGCATGGCTGCAGGACCCCGGacacccccttctctctcttcgAAGGTATGGCCGGGACCATCTACTTCCTGTCCGACCTGCTGCAGCCGCTGAAGTCCAGATTCCCGGCGTTTGAGATGTAAGCTCAGACGTGCTGCCGTGGATCCGGCCGGCCCAGCCCGGCGCTCTTCCACGCCTTCGTTCTGCACtcttgcttctgttttttgttttcggtcgttttgtttttttgtttttgttttttccagtcgTTCGATTTTGTTCGCTTCAAGTACAACGATACAGCGAGAGCCTGGAATCGGGGCGAGACGCGGGCCTCGCCGCTCCTGCCGCTAAAGAGAATCTCCCAGCCTCGGGGCCCCGGCCAGGCCTGGCCCGGGGGCGTCTGGGGCAGCTTGTCGCTTGTCTTCAGTGCCGCTGTGTGAATCACCGATGTCCAGCCGTGGCTAACCGTCACACTGCCATTAACTCCTGTCCACTCCGACTAAAGATGCATGCTTTAGGTCTGTCGTCATCCCATCAATCTCAAGTTATCTTACCTGATGCTGATTTACGTTCGTAACGAAACCTATGAAAATTGTCCTAGTGATGTCACAAAGGGGCGGGGCCTAATCCTTCCTTGATTCTTCGTGCTCAGAGTCCCGGGTCAGAGCGGCTCTATATAGAAATCtcagttgaaaaataaaaagcagagaaGTGTTCCTCCCCCCCGGCTGTGCATcgcccctccccccccccccgctgtgGAAGGCCGGTCCGATGGACAGTCCGTCCCAGCAGGTGGCGACACGGGCGCGTCTCTCCGGAGGCGGCTGGTTAGAGAGTTGGAGAGCGCGCGATCGGAAGGAAGCCTGGAAGACTTTTTAGAAAAGGAACCTGTAGACTCGTACTGACGGAGGTTTATTCTAGTCTATGATTttgtacaaaagaaaaaagaaaagacaaaaaaacttttcactcacttatttgaacacatttgaCTTTCTAAGGCACTCTAGGTATTGATCAACTCAGGCTTTGCGATGCTCTATTTGTAAATAACTGTTGTAGTTTTTGGTATGGGAGACAGACGATtcgatttttttctttttaagcttcatgttctgttatttttgaCTTTAATTTTCTATCAGTAATAGTAAGCAACGACAGAACTACTGATGCacttgtggtttttttttttttttttcatgtttgctACTTGACCGTGTATGTTCAGAACAATAAACTGACCTTGCACAGTA

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0005737 cytoplasm cellular_component
GO:0043295 glutathione binding molecular_function
GO:0008270 zinc ion binding molecular_function
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K25210 LANCL1; glutathione transferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000691 True 2820 mRNA 0.59 10 354488 366116

Neighbor

gene id symbol gene type direction distance location
AMCG00000693 NA coding downstream 6078 339733 ~ 348410 (-)
AMCG00000692 acadl coding downstream 16227 332223 ~ 338261 (-)
AMCG00000690 NA coding downstream 25439 307481 ~ 329049 (-)
AMCG00000688 unc80 coding downstream 162160 145779 ~ 192328 (-)
AMCG00000689 NA coding downstream 211979 131633 ~ 142509 (-)
AMCG00000696 erbb4,LOC107741926,LOC107555909,LOC107660610,LOC107662043,LOC107721020 coding upstream 164925 531041 ~ 536858 (-)
AMCG00000697 NA coding upstream 175940 542056 ~ 544156 (-)
AMCG00000700 LOC108441681,LOC108440448 coding upstream 224729 590845 ~ 612323 (-)
AMCG00000698 erbb4 coding upstream 277497 643613 ~ 647413 (-)
AMCG00000699 NA coding upstream 312898 679014 ~ 680483 (-)
G125515 NA non-coding downstream 226825 121280 ~ 127663 (-)
G125498 NA non-coding downstream 261833 92283 ~ 92655 (-)
G125497 NA non-coding downstream 263203 91051 ~ 91285 (-)
G125578 NA non-coding upstream 9704 375820 ~ 376770 (-)
G125591 NA non-coding upstream 43499 409615 ~ 410817 (-)
G125622 NA non-coding upstream 157405 523521 ~ 527501 (-)
G125625 NA non-coding upstream 231868 597984 ~ 598335 (-)
G125642 NA non-coding upstream 521038 887154 ~ 887476 (-)
AMCG00000687 map2 other downstream 110311 194644 ~ 244177 (-)
AMCG00000710 myo1b other upstream 941705 1307821 ~ 1312408 (-)
G125814 NA other upstream 1020727 1386843 ~ 1422410 (-)
AMCG00000719 NA other upstream 1112624 1478740 ~ 1500661 (-)
AMCG00000731 NA other upstream 1395913 1762029 ~ 1771025 (-)
AMCG00000741 gtf3c3,LOC104966512 other upstream 1463428 1829544 ~ 1831310 (-)

Expression


Co-expression Network