AMCG00000693


Basic Information

Item Value
gene id AMCG00000693
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 339733 ~ 348410 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000693
CTGCCTTTCCACCCTCTCAGCCTCCTCCGGCAGGACTTTGTGAACTAACCATCTTGTAAAATGGCACCCAAGAAGGACGTGAAGAAAGCAGAGCCCAAGGCCGCTGCTCCCGCACCAGCCGCCGCACCCGCACCCGAGCCGGAGAAGCCCAAAGGCATCGACCTGTCCAGCGTCAAGATCGAGTTCACCCAGGATCAACAGGAAGactTCAAAGAGGCCTTCCTCCTCTTCGACAGGACCGGCCAGAGCAAGATCACCTACAGCCAGGTGGCCGACGTCATGCGCGCTCTGGGCCAGAACCCCACCAACAAGGAGGTGAACAAGGTCCTGGGCAACCCCACCCCCGAGGAAATGAATGCCAAGGCCATTGACTTCGACCAGTTCCTGCCCATGCTCCAGACCGTGGCCAACAGCACAGAGAAGGGCGGCTACGAGGACTTTGTTGAGGGTCTGCGTGTCTTTGACAAGGAGGGCAACGGCACAGTGATGGGCGCTGAGCTGCGCATTGTGCTGACCACACTGGGAGAGAAGATGACTGAGGCTGAGGTAGACACTCTGCTCCAGGGACAGGAAGACGAGAACGGCTGCATCGCCTACGAGGCGTCTGTCCGGGGGTGTGAGCGGAAGATGGACACTCTCCCAAGGAGGGGTCCCTCTCCTCGCTGTGCCGTGGCACACCCACCCCCCGCTGGCCTCCAGCCCAGCCTGCGGACACACTGCCCACCACTCACAACACTCTGCTCCTCAAAGTCTTAA

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000693 True 756 mRNA 0.60 6 339733 348410

Neighbor

gene id symbol gene type direction distance location
AMCG00000692 acadl coding downstream 1472 332223 ~ 338261 (-)
AMCG00000690 NA coding downstream 10684 307481 ~ 329049 (-)
AMCG00000688 unc80 coding downstream 147405 145779 ~ 192328 (-)
AMCG00000689 NA coding downstream 197224 131633 ~ 142509 (-)
AMCG00000686 pofut2,LOC107741944,LOC107660604,LOC107565035,LOC107714363 coding downstream 219835 112162 ~ 119898 (-)
AMCG00000691 NA coding upstream 6078 354488 ~ 366116 (-)
AMCG00000696 erbb4,LOC107741926,LOC107555909,LOC107660610,LOC107662043,LOC107721020 coding upstream 182631 531041 ~ 536858 (-)
AMCG00000697 NA coding upstream 193646 542056 ~ 544156 (-)
AMCG00000700 LOC108441681,LOC108440448 coding upstream 242435 590845 ~ 612323 (-)
AMCG00000698 erbb4 coding upstream 295203 643613 ~ 647413 (-)
G125515 NA non-coding downstream 212070 121280 ~ 127663 (-)
G125498 NA non-coding downstream 247078 92283 ~ 92655 (-)
G125497 NA non-coding downstream 248448 91051 ~ 91285 (-)
G125578 NA non-coding upstream 27410 375820 ~ 376770 (-)
G125591 NA non-coding upstream 61205 409615 ~ 410817 (-)
G125622 NA non-coding upstream 175111 523521 ~ 527501 (-)
G125625 NA non-coding upstream 249574 597984 ~ 598335 (-)
G125642 NA non-coding upstream 538744 887154 ~ 887476 (-)
AMCG00000687 map2 other downstream 95556 194644 ~ 244177 (-)
AMCG00000710 myo1b other upstream 959411 1307821 ~ 1312408 (-)
G125814 NA other upstream 1038433 1386843 ~ 1422410 (-)
AMCG00000719 NA other upstream 1130330 1478740 ~ 1500661 (-)
AMCG00000731 NA other upstream 1413619 1762029 ~ 1771025 (-)
AMCG00000741 gtf3c3,LOC104966512 other upstream 1481134 1829544 ~ 1831310 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000299_04122601_04126314 MLE3, MYLZ3, MYL1 coding CI01000299 null 4122601 ~ 4126381 (+)