AMCG00000694


Basic Information

Item Value
gene id AMCG00000694
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 367576 ~ 414428 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000694
ATGACAAAGATCCTGACAGTGCGAGAGTTGGTGCGGGGCTTCAGGTCAGGGCTGTCCGTCTGCTGCAGCCGGAGTGGACGTGGCTGGAGAGACGCCGGGACACGACTTCTGAGCATGAAGatTGGGAGACACGGCAGCAGTTATTTCTGCGCCGTGGTGTGTTACCCGGTGACCTGGAGTGACCCCGGCCTTGCGCTGCGCTGCAGGAACAAGGGAAGAGTCTGGCTCAGCGATCAGGGCAGGAGTGGGGCGGTTCGAGCTGTCTGGGGCGTGGCTGCGTGGGAAGCCCTGAGGGGAAGAGCGTCCCAGTGGGTGGTGACGATGCTGATCGATTCACTGCGTAAGTGCCTGATTGGCTCGGCCTGCTGCTCAGCGGCTCGGCCCAGCATGGAGACGGTGGCATCACAGAGAGACCCCTGCGGctgcctcctctcctcccctgtcatcccctctcctctcccctccgcCCTGCAGGCACAGTCTGCACACCTGGTTCTGGACGACGGGACTCGGATGAAGGGCTTCTCATTCGGACATTCGCGGTCGTCGACGGGGGAGCTGGTGTTCAACACTGGGCTGGTGGGGTACCCCGAAGCCCTGACAGACCCCAGCTACAGGGGGCAGATTCTCACCCTCACCTACCCCATCGTGGGCAACTATGGCGTGCCCGACACCCAAGAGCTGGACAGCCTGGGTCTCAGGACCAACGTAGAGTCTGATCGCATCCAGgtgtCAGGGTTGCTGGTGCAGGACTACAGCCACGACTACAGTCACTGGAAGTCAGTGAAGAGTCTGGCGCAGTGGCTGCAAGAGGAGAAGGTCCCGGCCCTGTATGGAGTCGACACCCGGATGCTGACCAAAATCATCAGAGACAAGGGCACAGTTTTGGGGAAGATTGAGTTTGACGAGCAGTCCGTCGAGATCTACGACCCGAATCAGCGCAATCTGGTGGCGGACGTGTCCACGAAGGAGGTGCGTGTGTTCGGGAAGGGGAATCCCATTAAAATAGTGGCAGTGGATTGTGGGATCAAGCACAACATCATCCGTCTTCTTGTGAAGCGCGGCGCGGAGGTGCACTTGGTGCCGTGGGACCAGGACCTGCTGGGGCTGCAGTATGACGGACTGTTCATCTCTAATGGCCCTGGGGACCCTGCACTGGCCACCACACTCGTCCAGAACCTCCGCAAGGTGCTGGAGAGCGACCGTCGGGAGCCGGTGTTTGGTATCTGCATGGGCAACCAGATCACGGCACTGGCGGCCGGTGCCAAGTCCTACAAGCTGCCCATGGGGAACAGagGTCAGAACCAGCCAGTGTTGAACCTGCTGACGGGCCAGGCCTTCATAACGGCGCAGAACCACGGCTACGGCATCGACAGCCAGTCCCTCCCGCCCGGCTGGAGCCCACTGTTCGTCAACGCCAACGATGGCACCAACGAGGTGTCCAAGGTGCTGGTGCTCGGCTCCGGTGGACTGTCCATCGGCCAGGCCGGGGAGTTCGATTACTCCGGTTCTCAGGCCATCAAAGCCATGAAGGAAGAGAATGTGAAGACGGTGCTGATGAACCCCAACATTGCCTCGGTGCAGACCAATGAGCTTGGCAGCAAGCAGGCCGACTCAGTGTACTTCCTCCCTGTCACGCCGCACTTTGTGTCCGAGGTGATCCGCACCGAGCGGCCCGACGGCATCCTGCTGTCCATGGGCGGCCAGACGGCGCTGAACTGCGGTGTGGAGCTGTGTAAGAGCCCTGTGCTGATGTGTACGGTGTGTTCTCTCACAGGCGTGGAGCTGTATCAGAGCGGGGTGCTGCAGCGCTTCGGGGTGCAGGTCCTGGGCACGCCTGTGGAATCCATCATGGCCACCGAGGACCGGCAGCTCTTCTCTGACCGGCTGACGGAGATCGGCGAGAAGATCGCCCCCAGCATCGCCGTGGACACAGTGTCCGACGCCCTGCAGGCCGCTGAGCGGATCGGGTACCCGGTGATGCTGCGCTCTGCCTACGCCCTGGGGGGGCTGGGGTCGGGGCTGTGCGTGGACAGGGACCAGCTGCGGGAAACGGCCAGGAAGATCCTGGTGGAGAAGTCTCTGATGGGCTGGAAGGAGGTGGAGTACGAGGTGGTGAGGGACGTGGCGGACAACTGCGTGACCGTGTGCAACATGGAGAACTTTGACCCCCTGGGCATTCACACAGGCGACTCCATCGTGGTGGCGCCGAGCCAGACGCTGTCCAACGAGGAGTACCACCTGCTGCGTGAGACGGCCATCAAGGTGGTGCGGCACCTGGGCATCGTGGGCGAGTGCAACATCCAGTACGCGCTGCACCCTGGCTCGTTGGAGTACTGCATCATTGAGGTCAACGCCCGGCTCTCGCGCAGCTCCGCCCTCGCCTCCAAGGCCACGGGCTACCCCCTGGCGTTTGTGGCTGCCAAGCTGGCACTGGGCATCCCGTTGCCGGAGATCAGAAACGCGGTGTCGGAGAAGACCACGGCCTGCTTCGAGCCCAGCCTGGACTACATCGTCACCAAGGTCCCGCGCTGGGACCTGGACCGCTTCCAGGGCATGACCCGGGAGATCGGCAGTGCCATGAAGAGTGTGGGCGAGgtgaTGGCAGTGGGGCGCACTTTCGAGGAGAGTATCCAGAAGGCTCTGCGGATGTGCCACCCCTCTGTGAATGGGTTCGAGCCCCAGCTGCCCATGAACGAGGCCTGGGCAGAGCCTCCCGACCTGCAGCAGAACCTGGCTGTGCCCTCCAGCACACGTATCTTCTCTCTGGCAAAGTGGTTTCTGCACAAACTGCGGCGCATCACGGAGATGGAGAAACACCTGGGCCAGTACAGCAGCTCCACGGTGCCGCAGACGCTGCTGCTGAAGGCCAAGCAGGACGGCTTCTCGGACCGGCAGGTAGGCGCGGCGTTGCACCTGGAGGAGACGGAGGCCAGGGAGCTCCGGCTGAGACAAGGCATCAGACCCTGGGTCAAACAGATCGACACCCTCGCTGCAGAGTACCCTGCTGTCACCAACTACCTGTACTGCACCTACCATGGCCAgGAGCACGACATCGACTTCAGGGACCAGGGTGTGATGGTGCTCGGCTGTGGACCGTACCACATCGGCAGCAGCGTGGAGTTCGACTGGTGTGCCGTGTCGTGTATCCGGGCCCTGCGGCGGCTGGGCCGGCGCACCGTGGTGGTGAACCACAACCCCGAGACGGTCAGCACGGACTTCGACGAGTGCGACCGGCTGTACTTCGAGGAGCTGACGCTGGAGCGCGTGCTGGACGTGGTGCAGCAGGAGggcTGCAGCGGGAGCATCATCTCGGTGGGGGGGCAGATCCCTAATAACCTGGCCATACCGCTGCACCAGTGTGGCGTGTCCATCCTGGGCACCAGCCCCCTGCAGATCCACCGGGCCGAGGAGCGCTCTGTCTTCTCCACCATACTGGACCAGCTGGGCGTGGCGCAGGCGCCCTGGAGAGCCCTGAGCTCGCTGGAAGACGCCATCGCCTTCACCAGTCAAGTGGGCTACCCCTGCCTGCTGAGACCCTCCTACGTGCTGAGtgGCTCGGCGATGAACGTGGTCTATGGGCAGCAGGAGATGAAGAGGTTTCTGGAGGAGGCGACCCGGGTGTCTCAGGAGCACCCTGTGGTCATCACCAAGTTCATCGAGGGAGCCAGGGAGGTGGAGGTCGACGCCGTGGCCAAGCAGGGAAAGCGGCAGCACAGAGACGCTGGTATCTCCTCGGGGGTGAAGACTCAGACCTGCCTGCCGGGGTCTGGCGCTCCTCTCGGGGTCCTGGCCCACGCCATCACGGAGCACGTGGAGGATGCCGGGGTCCACTCCGGGGACGCCACGCTCATGCTGCCCACCCAGAACATCAGCCAGGGGgccctggagaagGTGAAGATTGCGACGAGGAAGATCGCCCAGGCGTTCGACATCTCGGGCCCCTTCAACACGCAGTTCCTCGTGAAGGGCAACGACGTCATGGTGATCGAGTGTAACCTGCGCGCCTCGCGCTCCTTCCCCTTTGTGTCCAAGACGCTGGGCGTGGACTTCATTGACGTGGCCACCAGGGTCATGGTGGGGGAGAACATTGACCAGAGCCGGCTGCCCACGCTGGACAACCCCATCATACCGGTGGACTACGTGGGCATTAAGGCCCCCATGTTCTCCTGGCCGCGCCTGAGGGACGCCGACCCCGTGCTGCGCTGCGAGATGGCGTCGACCGGAGAGGTGGCCTGCTTTGGGTCCGATATCTACTCGGCGTTCCTGAAGGCCATGCTGTCCACGGGCTTCAAGCTCCCTCAGAAGGGGATCCTCGTCGGGATTCAGCATTCCTTCCGACCAAAGTTCTTGGCCGCGGCACACCAGCTGAATAAGGAAGGCTTCAAGCTGTACGCCACCGAGGGCACCTCTGCCTGGCTCAACGCCAACGACGTGCCCGCCATCCCGGTGTCTTAA

Function

GO: NA

KEGG:

id description
K01948 CPS1; carbamoyl-phosphate synthase (ammonia)

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000694 True 4458 mRNA 0.63 37 367576 414428

Neighbor

gene id symbol gene type direction distance location
AMCG00000683 unc80 coding upstream 223681 138105 ~ 143895 (+)
AMCG00000681 NA coding upstream 326980 38752 ~ 40596 (+)
AMCG00000680 NA coding upstream 341295 21907 ~ 26281 (+)
AMCG00000695 cps1 coding downstream 16 414444 ~ 414795 (+)
AMCG00000702 vwc2l coding downstream 697453 1111881 ~ 1133185 (+)
AMCG00000705 NA coding downstream 811889 1226317 ~ 1233934 (+)
AMCG00000708 NA coding downstream 834313 1248741 ~ 1249425 (+)
AMCG00000704 NA coding downstream 842353 1256781 ~ 1272965 (+)
G125565 NA non-coding upstream 11847 354488 ~ 355729 (+)
G125516 NA non-coding upstream 238449 128859 ~ 129127 (+)
G125510 pofut2 non-coding upstream 250274 116111 ~ 117302 (+)
G125485 NA non-coding upstream 274956 92283 ~ 92620 (+)
G125484 NA non-coding upstream 276291 91043 ~ 91285 (+)
G125597 NA non-coding downstream 42074 456502 ~ 487203 (+)
G125605 erbb4,LOC107555909,LOC107741926,LOC107662043,LOC107721020,LOC107660610 non-coding downstream 115471 529899 ~ 531912 (+)
G125612 NA non-coding downstream 160862 575290 ~ 575492 (+)
G125613 NA non-coding downstream 182359 596787 ~ 597135 (+)
G125684 myo1b non-coding downstream 889667 1304095 ~ 1307335 (+)
AMCG00000723 crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 other downstream 1185268 1599696 ~ 1606031 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other downstream 1254417 1668845 ~ 1698573 (+)
AMCG00000734 NA other downstream 1390979 1805407 ~ 1814157 (+)
AMCG00000848 NA other downstream 5046873 5461301 ~ 5465981 (+)
G127134 NA other downstream 8202771 8617199 ~ 8620195 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_037352 cps1 coding NC_007120.7 CM002893.2 39026311 ~ 39139722 (+)