AMCG00000703


Basic Information

Item Value
gene id AMCG00000703
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 1135468 ~ 1148599 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000703
GAGATGTGAAGTGAAGACGCGGCGCAGGACCCGGATGTGTAAATAGACCAGTGTCCGGCCATGCTGCGAGGCTGCTCTGCGAATCAGGCCAGTTCTGGACCCGCGGACCGGCGCTCCGCGACCGGCACCGAGGCCCGCTGCTGGACGGAAACCCGGCTGTCGGTCGAGCGGCTCCGAGACCTGCTGCTTTGCTCCAAATGCGATGACGTCCTCAGCCAGCCCGTGTGTCTGGGGGGGTGCGAACACGTGTTCTGCCGgtcCTGTGCCGGGGCGTGTGTAAGTgagggctgcagtgtgtgtcaCAGCCCCGTCTGGGTCAAGGACATCCAGATACACAGACAGCTGGACAGCATCACTCAGCTGTACCGGGAACTGGACGCCCTGATTCGGCATGAAGCCGCCGAGGACCCAGTGTCAGAGTGCCGTCCCCCGACCCCCGAGGCCCGGCGGCCCCCACTCCTCAAGCACAAGAAGAACTTCAGGATCTGGTTCAGCCCGCGCAGCCGCAAGGTCCGATGCCAGGCGGAGGAGCCGGAGAGGGACGGCGCCGGGAGACCTGGGCAGCCGTGCGGAGAGCAGGAGGAGAAGGGTGTCCCGGAGCCGCCTGGGGGTCCGTCACGCTGTGCAGATGTCTCCGTTTTCGACTTCTCTCCCTCCAACTCCTCCCAGGGGTCCTGCGCCACACCCCAGAAAAGCAGGAACAGGAAGAAGACCCCCAGGAAGCCGGCGCCCCGGCGGAAGCGGAGCGGCTCGACCCGGGTCAACCAGAAGAAGAGGCTAGAGGACGTGAACCGGGAGTGGGGCTTCCAGACAGGGATCCCCGGgagtgagggggagggagaggggccTCCAAGAAGAGTGGTGTCCTTCCTCGGCGACTCTCCGCTGGAGCCCGGACCCCTGGAAGAGCCCGGTTCCGACACTCCTGCGAGAGGATGCAGGGGGGCGGTCTCCCGGCAGACACGGAGACCCCTGGCTGCTCGTGACACGCCGGTGGTGGGGCAGGATGACCACGAGTCAGGTCCGAGCGAGAGTCTCTGCCCCCAGGCAGGAGATCCAGTGTCCTGTCCTTCAGAGACGGGCCGCCCCGGTGCTGCCGACGAGACCCCCTGTACAGAACCAGCCCAGGTCCAGGGGCCGGTGGGCCGTGCTCTGAAGAGACGCAGGCCTGTGTCAGGCTCCTGCCCAGAGAGATCCCCGAAGAGagccaggaccaccgggagcaGCCCCCGCACCCCTGCGTCCTCCCGGCTGACCAAGGAGAGCATCTCGGGAGGAGGGGGCTCCCCGCCGCCGGCCCCCCACACGCCCAGCACCAGGACCCCCCAGAGCCCCGCCCCCCAGGGCAGCCCTGCTGCCGTGAAGAGGAACCACATGGGCGAGACGGCGCTGCACCTGGCTGCCATCAAGGGGGACGTGTCGGCCGTGCAGGAGCTCCTGAGCTGCGGAGTCGACCCCAACCTGAAGGACCACGCCGGCTGGACGCCCCTGCACGAGGCCTGTAATCACGGACACCAGGCGGTGGTGGAGGTGCTGCTGCAGCAGGGGGCGCTGCTGAACACGCCAGGCTACCAGAACGACTCGCCGCTGCACGACGCCGTGCGGAACGGACACACCGCTATCGCCCGGGTGCTGCTGGAGCGCGGAGCCTCGCAGAGCGTCGTGAACATCTTCGGGCTGCGGCCGGTGGATTACGCCGAGACGGCCGAGATGAAGGCTGTGCTGGAGTCCGCCCCCCCGACCCCCACAGCTCTGCGCTCCCCTCTGAGCCCCACATCCAACGTGAACAAGGCCCCTGGGAGCCACGGCCTTCAGGACAGGGTGACAGTGCTGGGCAGCCGACTTACCAAGCCGCAGCTGGCCAAGATCGCCCGGCTGGGGAGGATGCTGGGAGCCCGGCAGACAGACGCTTTCTCCAGCTCGGTGACCCACATGGTGGTCCCGGACGCCCCCATGCCCACCACTCTGAGCTGcctgctggggctgctgggaggCTGCTGGATCCTGCGCTTCCAGTGGGTGGAGGACTCCCTCAAGGCAGGCGTCATGGCGCTGGAGACGGAGTACGAGGCCGGAGAAGGGCCCCAGCGCAGCCGCCTGAACCGGGAGAACCTGCTGCCCCGGCTCTTCGACGGCTGCCTCTTCTTCTTCCTGGGCTCCTTCCAGCAGCCGGGAAAGGCAGACCTGGCACGGCTGGTCCAGGAAGGCGGCGGGCGGCTGCTCTCCCGGCAGCCCAAGCCTGACAGCGACGTCACGCAGACGGTCAACACGGCGGCCTACCACGCCGCACCGGGCTCAGACCAGGCCTCCTGCACGCAGTACGTCCTGTACGACCCGCGTTCTGCCTACCGGCCCGCGCGCATCCGCCTGGGCAAGGTGTGGTCGGCGCCCTCCTCCTGGCTGCTGGATTGCATTGCCGCCTTCCGGCTCCTACCCGTGCCCGAACCCAAACCGGGCACTGAGGCTCTGCGCTCTGCCGCAGTGGGGGGGTCCGGTAGGTGATCCCCATCAACTCCTCTGCCTGAGCACCGACTGTGTATTGTTTCTGACGATCTCTGTTGCATCATCGTTGAATACTGGAATCTCCAATCGTTGAtgataatcaataataataataaaacactataaATGTGATGTCATTGGTaacttcattttcagtttcctgGAACAGCTGGAGCAGCGGCTCTCGGctggccctggaggagccccGCCCTGCTGGGGTTcattccaaccgagctctcaattacctaattggacccttaattgaagtagtaatttcctaaatcagagccttttcattattgtaaac

Function

GO: NA

KEGG:

id description
K10683 BARD1; BRCA1-associated RING domain protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000703 True 2809 mRNA 0.66 11 1135468 1148599

Neighbor

gene id symbol gene type direction distance location
AMCG00000701 NA coding downstream 275657 842271 ~ 859811 (-)
AMCG00000699 NA coding downstream 454985 679014 ~ 680483 (-)
AMCG00000698 erbb4 coding downstream 488055 643613 ~ 647413 (-)
AMCG00000700 LOC108441681,LOC108440448 coding downstream 523145 590845 ~ 612323 (-)
AMCG00000697 NA coding downstream 591312 542056 ~ 544156 (-)
AMCG00000706 NA coding upstream 5711 1154310 ~ 1205897 (-)
AMCG00000707 NA coding upstream 121754 1270353 ~ 1276004 (-)
AMCG00000711 NA coding upstream 169449 1318048 ~ 1328817 (-)
AMCG00000709 NA coding upstream 189349 1337948 ~ 1344902 (-)
AMCG00000716 NA coding upstream 300243 1448842 ~ 1450137 (-)
G125642 NA non-coding downstream 247992 887154 ~ 887476 (-)
G125625 NA non-coding downstream 537133 597984 ~ 598335 (-)
G125622 NA non-coding downstream 607967 523521 ~ 527501 (-)
G125591 NA non-coding downstream 724651 409615 ~ 410817 (-)
G125578 NA non-coding downstream 758698 375820 ~ 376770 (-)
G125685 NA non-coding upstream 120632 1269231 ~ 1307353 (-)
G125712 NA non-coding upstream 170935 1319534 ~ 1319813 (-)
G125719 NA non-coding upstream 174904 1323503 ~ 1328648 (-)
G125845 NA non-coding upstream 426762 1575361 ~ 1577346 (-)
G125875 NA non-coding upstream 673653 1822252 ~ 1827742 (-)
AMCG00000687 map2 other downstream 891291 194644 ~ 244177 (-)
AMCG00000710 myo1b other upstream 159222 1307821 ~ 1312408 (-)
G125814 NA other upstream 238244 1386843 ~ 1422410 (-)
AMCG00000719 NA other upstream 330141 1478740 ~ 1500661 (-)
AMCG00000731 NA other upstream 613430 1762029 ~ 1771025 (-)
AMCG00000741 gtf3c3,LOC104966512 other upstream 680945 1829544 ~ 1831310 (-)

Expression


Co-expression Network