AMCG00000709


Basic Information

Item Value
gene id AMCG00000709
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 1337948 ~ 1344902 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000709
gaaaaaccCCGGAAGTCTCGCTATCCCACAAGTCCCCGGCGCAAGGCATGACGGGAGGAAGGGCCCGGTACTGGGAGCAAGGAACAGAGGAGCAGCCATAGAGAGTGCACCGCTGTAGTGGACGCGGCCGGCGGCTTTAAGAGGTCAGACcaccccttccctctctctcattggACGTGTCCCGAGGCCACCGGGGCGGGTGGAGGGGCCCACGGAAGGGTCTGCTCAGCGGGGAAGTGACACTTTCTCTCGGTCCGCGGCCGGCCTGTCCTCCGGGGATCGGTGCCCTTCTCAGCCGTCAGTTAACGCCGTGTGTTTGGTGACATCCGTCTCAGGCATATCTGAAAGCAAACCCGCCTGTTGCCACTGAGTCATTGCTCCAAGTCTGCAGGGACGATGGCCACCCGCATGTTCGAAGGGAAGCACCATGCCACGCTCTACCAGAAGTACCGCTTCGCCCCCCCCGACGAGCTCAAGACCCTGATCCTTGACTATCTGGACAAGAAGAAAGGGCCGCCCCACCTGCTGGCCGTGGACCTGGGCTGCGGGACGGGTCAGAACACGCGGCTCATGGCCCCTCTGTTCAAGGAGATGGTCGGCATCGACGTCAGCGAGTCCCAGGTGGAGGAGGCGAGAGCCGTGCCGGGATTCCCCAACATCACCTACAGGGTTGGCACGGCCGAGAAACTGCCCTTCCCGGACGGCTCGGTAGACGTGATCTTGGCTGCGTCGGCCGCGCACTGGTTCCACACCGAGAACTTCGTCAAGGAGGCGGGCCGGGTCCTCAAGCCCCTTGGCTGCCTGGCGCTGATGGGCTTCGGCAAGAACATGGAGTACCACTACGGGAACTGCGAGGGGCGGCTGACCGACATTTTCAACGAGTTCACAGATGCCCTGCTGCCCTACACCAGCAAGCAGGTGGCCATCGCGGACAGCGCGCTGCAGGAGGTGCTCGATGCCATCCCCTTCCCCGAGAAGGAGAGGGTGGACAACCTGCCGGTGACGTACAAGGTGCCGGTGCAGAACGCAGTGGGCTTCTTCGAGTCCTTCTCCATGTTCCAGGCCTACGAGAGGGCCGACCCGACAGCTGCCCGGGCCCTGCTGGAGACCACACAGCGCAGGTTCCTGGAGGAGATGGGAGACGTGTCCCCTGAGATGGAGCTGGACGTGGTTCTGAAGTACTTCTGTGTCCTGGCTTGTAAGCCTCGCTGACCCCGAGCAGGACCAGAGCAGGACGGGCGGGCTGGGCGTCTCTGTCGGGATGCGGGAGCTGTAGTTTTAATCGGGCCGCTCCTGTTAGTTCAGTGGCGCTTGCTCTGTCCGTGTGTGAGACTCAAATCCCTGCTCTTGTTGATCACATGACATGTATCAGGACCTTCACTGTTTAATTAAGGAGCTCCTCGATCTTAGTTTCTTTTTCCTGTTCTTTATAAATATCTACACATGTATCTTCTACTCTTCCCTTGGAGGAAGGCGTTGACCGAAGCTGAtcacaataaatacactttCCTCTTctaatataaataagtatttatctCCTAAACGCAAACCTTGCCTCCCTGTCTCATCTTCGCCCAGAAGGAGTGACCATATCGAACTCACAGGGCGGCACAGTTTGCGTTGGTGAACAGGTGATTTGAGTTTTCCCCCGATCGTAATACCAGGATTGAGTTCTGGGGGCTGCGAACGGCTGATCAGGAATGCTGATTTTACCacgaaaaacaataaaaacaacattgaaactGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000709 True 1746 mRNA 0.58 7 1337948 1344902

Neighbor

gene id symbol gene type direction distance location
AMCG00000711 NA coding downstream 9131 1318048 ~ 1328817 (-)
AMCG00000707 NA coding downstream 61944 1270353 ~ 1276004 (-)
AMCG00000706 NA coding downstream 132051 1154310 ~ 1205897 (-)
AMCG00000703 NA coding downstream 189349 1135468 ~ 1148599 (-)
AMCG00000701 NA coding downstream 478137 842271 ~ 859811 (-)
AMCG00000716 NA coding upstream 103940 1448842 ~ 1450137 (-)
AMCG00000718 NA coding upstream 123795 1468697 ~ 1470445 (-)
AMCG00000720 idh1 coding upstream 162399 1507301 ~ 1510191 (-)
AMCG00000721 NA coding upstream 165554 1510456 ~ 1511147 (-)
AMCG00000728 NA coding upstream 233897 1578799 ~ 1589393 (-)
G125719 NA non-coding downstream 9300 1323503 ~ 1328648 (-)
G125712 NA non-coding downstream 18135 1319534 ~ 1319813 (-)
G125685 NA non-coding downstream 30595 1269231 ~ 1307353 (-)
G125642 NA non-coding downstream 450472 887154 ~ 887476 (-)
G125625 NA non-coding downstream 739613 597984 ~ 598335 (-)
G125845 NA non-coding upstream 230459 1575361 ~ 1577346 (-)
G125875 NA non-coding upstream 477350 1822252 ~ 1827742 (-)
G126005 NA non-coding upstream 1083039 2427941 ~ 2520220 (-)
G126020 NA non-coding upstream 1115813 2460715 ~ 2462488 (-)
G126037 NA non-coding upstream 1213089 2557991 ~ 2558249 (-)
AMCG00000710 myo1b other downstream 25540 1307821 ~ 1312408 (-)
AMCG00000687 map2 other downstream 1093771 194644 ~ 244177 (-)
G125814 NA other upstream 41941 1386843 ~ 1422410 (-)
AMCG00000719 NA other upstream 133838 1478740 ~ 1500661 (-)
AMCG00000731 NA other upstream 417127 1762029 ~ 1771025 (-)
AMCG00000741 gtf3c3,LOC104966512 other upstream 484642 1829544 ~ 1831310 (-)
G126017 NA other upstream 1106966 2451868 ~ 2457883 (-)

Expression


Co-expression Network