AMCG00000738


Basic Information

Item Value
gene id AMCG00000738
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 1792408 ~ 1798431 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000738
ATGGCGCCTCCCGCCAAACACCCATCCCCCATCGCACAGCCGTCGGCCTGGTCCACTGCGGAGAGCGGAGAGGGGGGGCGGGACAACGAtatggagaagagaagaaaatcgAATCGGTTACTTTGGTGGCTGTGGCGACGGAAGCCGCGCAGGGTTGCCGGCCAGCGACTCCAGGAGCGACTCCACGGCGGACGGcaCCGAAGCCCGGCGTGCAGTAGCCGCTCCGGGATGGAGGCCGAAGCCGCTAGCTCGGTGGAAAAAGCCCAGAGAGGGGTTTCTCAGCGCTGGGCCAGACAGTGGCGGGGGGGCAGTGACGTGTGTGTGCTGGCTGAGCTCTCCGAGGCGCTCCGACGGACCAACGAGAGTGACCTGCGCCGCTTCTTCTCGCAGTTCGGGCCGGTGAAGGAGGTGAAGATTGTGAGTGACCatggAGGTTTCCCAGACACCAGCCCCAGCGTAGCCCCCCCAGCTCCTGGGGGCACCCTGTACCTCACCACCCCCACTGGATACCCCTACACGTTCCACAATGGCGTGGCGTACTTCCACAGCCCGGAGCCCAGCCTCACCCAGAACCACTGGCCTCCACGGTCAGTGTCCAGTTCTCCTGTGATGGTGACCCACCAGGCCCAGCCCGTCTTCCCACAGCCTTCCTACCACCACTACCAGGTCAGTGAGACGCCCCGATGCACCTGCACACTCCGGACACAAACCACAGAGTGCGTAGGCCTCTGCGCAGTGCGTCCCGGGACACTGGCAGTGGAGCCTCCCCCAGGTAGGGGCAGAGCGGAGCCGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000738 True 795 mRNA 0.65 8 1792408 1798431

Neighbor

gene id symbol gene type direction distance location
AMCG00000730 LOC107389566,LOC107095702,LOC101072759,LOC105358294 coding upstream 82012 1704794 ~ 1710396 (+)
AMCG00000725 NA coding upstream 147770 1638355 ~ 1644638 (+)
AMCG00000724 dnajb11 coding upstream 171017 1613837 ~ 1621391 (+)
AMCG00000722 NA coding upstream 197805 1590362 ~ 1594603 (+)
AMCG00000717 NA coding upstream 216969 1554678 ~ 1575439 (+)
AMCG00000737 NA coding downstream 26438 1824869 ~ 1830750 (+)
AMCG00000736 NA coding downstream 71148 1869579 ~ 1873692 (+)
AMCG00000735 vps16,LOC101164202,LOC106575790 coding downstream 76567 1874998 ~ 1885085 (+)
AMCG00000733 rpe,LOC106919839,LOC103134215,LOC108239723,LOC101467395,LOC102796346,LOC100692108 coding downstream 87149 1885580 ~ 1889165 (+)
AMCG00000745 NA coding downstream 145217 1943648 ~ 1945167 (+)
G125756 NA non-coding upstream 170520 1617808 ~ 1621888 (+)
G125767 NA non-coding upstream 183198 1594823 ~ 1609210 (+)
G125736 NA non-coding upstream 365465 1426633 ~ 1426943 (+)
G125713 NA non-coding upstream 463769 1323503 ~ 1328639 (+)
G125684 myo1b non-coding upstream 485073 1304095 ~ 1307335 (+)
G125955 NA non-coding downstream 493404 2291835 ~ 2293872 (+)
G125986 NA non-coding downstream 629239 2427670 ~ 2520585 (+)
G126036 NA non-coding downstream 759561 2557992 ~ 2558257 (+)
G126044 NA non-coding downstream 967824 2766255 ~ 2766539 (+)
G126050 NA non-coding downstream 1072485 2870916 ~ 2885184 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other upstream 93835 1668845 ~ 1698573 (+)
AMCG00000723 crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 other upstream 186377 1599696 ~ 1606031 (+)
G125561 NA other upstream 1388817 339640 ~ 403591 (+)
AMCG00000734 NA other downstream 6976 1805407 ~ 1814157 (+)
AMCG00000848 NA other downstream 3662870 5461301 ~ 5465981 (+)
G127134 NA other downstream 6818768 8617199 ~ 8620195 (+)
AMCG00000949 NA other downstream 8301852 10100283 ~ 10154187 (+)
AMCG00001002 myo3b other downstream 10201233 11999664 ~ 12011425 (+)

Expression


Co-expression Network