AMCG00001005 (myo3b)


Basic Information

Item Value
gene id AMCG00001005
gene name myo3b
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 11925325 ~ 11933099 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001005
ATGATTGGCTTGGAAGCTCTGGCAGATCCCTCCGAAGACTGGGACATCATAGAGACCATCGGGAAAGGAACTTATGGGAAAGTCTACAAAGTCACCAGCAGAAAGGATGGGAGCGTGGCTGCTGTGAAGGTTTTGGATCCCATAAATGTAAGTGAACAGGAGTGCGAGAAGCTGCGCACAGCACCAGCACATACTGTTCACCTCTGGGATGTTGACGAGGAGATCGAGGCCGAATATAACATCCTGCGCTCCCTGTCCAATCATCCCAACGTTGTCAAGTTTTATGGGATGTTCTACAAGGCGGATGATGTCTCAGGGGGGCAGCTATGGCTGGTCCTTGAGctGTGTAATGGGGGCTCTGTCACAGACCTCATCAAAGGACTGCTCATGCGTGACCAACGCTTGGATGAAGCTGTAATCTCATACATCTTATATGGTGCTCTCTTGggTCTTCAGCATTTGCACAATAACCGCATCATTCATCGTGACGTCAAGGGAAACAACATTCTTCTGACAACAGAAGGAGGAGTCAAGCTCGTTGACTTTGGTGTGTCAGCTCAGCTCACCAGTGCTCGTTTGAGAAGAAATACTTCAGTTGGAACTCCATTTTGGATGGCTCCCGAGGTCATCGCTTGTGAACAACAGTATGACTATTCATATGACGCTCGTTGTGACGTGTGGTCACTCGGCATCACTGCCATTGAACTGGGTGATGGAGATCCCCCTTTGTCAGAAATGCACCCTGTCAAAGCCCTGTTCAAGATCCCCCGGTAA

Function

symbol description
myo3b Predicted to enable several functions, including ATP binding activity; actin binding activity; and cytoskeletal motor activity. Predicted to act upstream of or within protein phosphorylation and visual perception. Predicted to be part of myosin complex. Orthologous to human MYO3B (myosin IIIB).

NR:

description
PREDICTED: myosin-IIIb

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001005 True 774 mRNA 0.49 6 11925325 11933099

Neighbor

gene id symbol gene type direction distance location
AMCG00001006 NA coding upstream 16013 11882644 ~ 11909312 (+)
AMCG00001004 ubr3 coding upstream 53196 11848377 ~ 11872129 (+)
AMCG00000994 NA coding upstream 78165 11840490 ~ 11847160 (+)
AMCG00000995 NA coding upstream 85432 11826376 ~ 11839893 (+)
AMCG00001001 NA coding upstream 109000 11815603 ~ 11816325 (+)
AMCG00001007 myo3b coding downstream 18276 11951375 ~ 11962697 (+)
AMCG00001009 sp5 coding downstream 81615 12014714 ~ 12017222 (+)
AMCG00001008 NA coding downstream 86706 12019805 ~ 12034616 (+)
AMCG00001003 gad1 coding downstream 107226 12040325 ~ 12062111 (+)
AMCG00001013 NA coding downstream 139404 12072503 ~ 12078897 (+)
G127774 atp5b,LOC107682211,LOC103355037,LOC102782720,LOC100705231,LOC102302090 non-coding upstream 182575 11671768 ~ 11742750 (+)
G127509 NA non-coding upstream 1480388 10442993 ~ 10444937 (+)
G127278 NA non-coding upstream 2547736 9363107 ~ 9377589 (+)
G127206 NA non-coding upstream 2842444 9081327 ~ 9082881 (+)
G127144 NA non-coding upstream 3285502 8638596 ~ 8639823 (+)
G127924 NA non-coding downstream 161042 12094141 ~ 12096863 (+)
G128074 LOC103479331,LOC106632289,LOC101486364 non-coding downstream 606982 12540081 ~ 12540318 (+)
G128101 NA non-coding downstream 672940 12606039 ~ 12655172 (+)
G128107 ola1,LOC107660044 non-coding downstream 705886 12638985 ~ 12676174 (+)
G128171 atp5g3,atp5g2,LOC101062993,LOC105908030 non-coding downstream 904552 12837651 ~ 12841008 (+)
AMCG00000949 NA other upstream 1771138 10100283 ~ 10154187 (+)
G127134 NA other upstream 3305130 8617199 ~ 8620195 (+)
AMCG00000848 NA other upstream 6459344 5461301 ~ 5465981 (+)
AMCG00000734 NA other upstream 10111168 1805407 ~ 1814157 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other upstream 10226752 1668845 ~ 1698573 (+)
AMCG00001002 myo3b other downstream 66565 11999664 ~ 12011425 (+)
AMCG00001022 NA other downstream 355851 12288950 ~ 12385042 (+)
AMCG00001098 NA other downstream 3217176 15150275 ~ 15184392 (+)
G128823 NA other downstream 3476013 15409112 ~ 15420880 (+)
AMCG00001114 NA other downstream 3527433 15460532 ~ 15463853 (+)

Expression


Co-expression Network