AMCG00001008


Basic Information

Item Value
gene id AMCG00001008
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 12019805 ~ 12034616 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001008
ATGGCGACGGAGGCGCGTTCCCCCCCGCGCATGAGCAGTGCGCACATGAACCGGCTCTGCGCCAGCTTTCACACTAAGCGTCTGCGCAGGCGCCGCTCTCGGTCCAGGCTGTCGCGATGCGCCGCAGGGAGAGTAACAGGTCGCAATGCGTCGGCCAGTCGCCACGAAGTGTGCCCAGGGACAAGgTCTCGGGACAGCTTGAAATTCTTGATCCCGAAGAGTCGATGCCACCCGAACCGCCTGAGAACATGTCAAGatgaaaaacaggCCAACTCTAGAGGGAAGCATGATACCATCTCCGTGGAGGCTCCTGATTTCATCCCTGCGATTGTCCAGGACCCCCGGAGACATCCGGACTCTTCCGGTGCAGAAGAGGATGAGGATGACAGTGAGGATGAAGAAGACAGTGAGGGTGATGAAAGGAAGGCGCCGATAGAGTTGCTGGGAGAGttccTGCAGTCCGTGATGGATAAAAATTACACCCTGGCAAACAAACTCTGTCAGATGATTCTTATTTATGAGCCTGACAACCCAGAGGCCAAACAATTTATTCCCGTTATTGAAGAGAAGTTGCTGATAGACCAGGTGGAAGAggagagtgaggaggaggaggaggaggaggaggaggaggaggactcTGATGCTGGTGAAGACAGCAGTGACCAGAGCGACAGCAGCGAGAGTGAGGTCACTTCCTCTGGAGACTCGGGCACTTCCTCGTCAGAGGAAGACAATgaagaatgtaaaaaataaagactgaacAATTGAATTACTGTTTGCAGatattatatatcattattattttccttgttaCACATGAATTGggtgtttttaaatacagtacctAGGTATGTTATCTTATTTTTAAGTATgcacaatatacatataaacatgaCAGTGCTGTTGCATTGGTTTTCTACACCCATTGTAGCTAGTATCAATGCTAGTCAAAGTGTTATATTTCCTTTCCTTAGAGCTGTAAACTGCAAAAGCATGAAGCGGATTTTGTGAATATTTCTTGGTTTGTAATTcatacatttagtttaatattattgttatatccGTAGGATTTTTCCATTACTGTAAAAGATCAAATGCATCCTGAAGTTAATGTAAAATCTGTGATGAACAGAATTAGtaataattaaaccaaaaatgttCAAATTCACGTGaatctttgttttcaaatgctaTATAAAGCATGTTCATTTATGTTGttctaaaattaaatgtattcatgtaatgAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001008 True 1247 mRNA 0.44 8 12019805 12034616

Neighbor

gene id symbol gene type direction distance location
AMCG00001009 sp5 coding upstream 2583 12014714 ~ 12017222 (+)
AMCG00001007 myo3b coding upstream 57108 11951375 ~ 11962697 (+)
AMCG00001005 myo3b coding upstream 86706 11925325 ~ 11933099 (+)
AMCG00001006 NA coding upstream 110493 11882644 ~ 11909312 (+)
AMCG00001004 ubr3 coding upstream 147676 11848377 ~ 11872129 (+)
AMCG00001003 gad1 coding downstream 5709 12040325 ~ 12062111 (+)
AMCG00001013 NA coding downstream 37887 12072503 ~ 12078897 (+)
AMCG00001010 gorasp2,LOC103354349,LOC106928304,LOC103129211,LOC105930246,LOC102238218 coding downstream 45382 12079998 ~ 12092059 (+)
AMCG00001012 NA coding downstream 107114 12141730 ~ 12149295 (+)
AMCG00001011 NA coding downstream 115246 12149862 ~ 12157026 (+)
G127774 atp5b,LOC107682211,LOC103355037,LOC102782720,LOC100705231,LOC102302090 non-coding upstream 277055 11671768 ~ 11742750 (+)
G127509 NA non-coding upstream 1574868 10442993 ~ 10444937 (+)
G127278 NA non-coding upstream 2642216 9363107 ~ 9377589 (+)
G127206 NA non-coding upstream 2936924 9081327 ~ 9082881 (+)
G127144 NA non-coding upstream 3379982 8638596 ~ 8639823 (+)
G127924 NA non-coding downstream 59525 12094141 ~ 12096863 (+)
G128074 LOC103479331,LOC106632289,LOC101486364 non-coding downstream 505465 12540081 ~ 12540318 (+)
G128101 NA non-coding downstream 571423 12606039 ~ 12655172 (+)
G128107 ola1,LOC107660044 non-coding downstream 604369 12638985 ~ 12676174 (+)
G128171 atp5g3,atp5g2,LOC101062993,LOC105908030 non-coding downstream 803035 12837651 ~ 12841008 (+)
AMCG00001002 myo3b other upstream 8380 11999664 ~ 12011425 (+)
AMCG00000949 NA other upstream 1865618 10100283 ~ 10154187 (+)
G127134 NA other upstream 3399610 8617199 ~ 8620195 (+)
AMCG00000848 NA other upstream 6553824 5461301 ~ 5465981 (+)
AMCG00000734 NA other upstream 10205648 1805407 ~ 1814157 (+)
AMCG00001022 NA other downstream 254334 12288950 ~ 12385042 (+)
AMCG00001098 NA other downstream 3115659 15150275 ~ 15184392 (+)
G128823 NA other downstream 3374496 15409112 ~ 15420880 (+)
AMCG00001114 NA other downstream 3425916 15460532 ~ 15463853 (+)
G129365 zgc:162707,LOC107749877,LOC107592986,LOC107668408,LOC107596553 other downstream 5988444 18023060 ~ 18044251 (+)

Expression


Co-expression Network