AMCG00001010 (gorasp2,LOC103354349,LOC106928304,LOC103129211,LOC105930246,LOC102238218)


Basic Information

Item Value
gene id AMCG00001010
gene name gorasp2,LOC103354349,LOC106928304,LOC103129211,LOC105930246,LOC102238218
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 12079998 ~ 12092059 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001010
AGCGACTGCCACGTAACAGCAGTGTGTGTCGCTGGCGCCGGAGTTGGCCGCAGCGCTGCAAGAGAGCCGGAGCCGAGCAGGGACACGTCCGAGCCACACAGTCCAGAAAGCGGCCGACATGGGGGCAGCGCAGAGTGTTGAGATCCCCGGCGGAGGGTCCGAGGGTTACCACGTCCTCAGAGTACAAGAGAATTCTCCTGGACACCGGGCAGGTCTTGAACCCTTCTTTGACTTCATAGTTTCCATTAATAATACACGATTGAATAAAGACAATGACACACTCAAAGACCTCTTGAAAGCAAATGTGGAGAAGCCGGTGAAGatgctggtgtacagcagcaAAACGCTGGAGCTGAGAGAGAGCTCAGTCACCCCGAGCAAcatgtggggggggcagggactACTTGGGGTCAGCATACGTTTCTGCAGCTTCGAGGGTGCCAACGAAAATGTGTGGCACGTACTGgaAGTGGAGCCAAATTCCCCTGCTGCTCTGGCAGGCTTGCGACCTCACACTGATTACATCATTGGGGCGGACACTGTCATGAATGAGTCGGAGGATCTGTTCTCACTCATTGAAACGCACGAGGGGAAAGGTCTGAAACTCTATGTATACAATACGGACACTGACAATTGTCGAGAAGTTGTCATCACGCCAAACACTGCTTGGGGTGGCGAGGGCAGcCTAGGTTGTGGGATAGGCTATGGCTATTTACACAGGATACCCACCCGCCCATTTGAAGAAGGAAAGAAGATTAGCTTACCAGGCCAGATACCCAGTACACCTGTCAGTCCATTTAAAGATGGCTTTACAGAGGTGCAGCTTTCAGCTGTTAGTCCTCCGCCGGCTGTGCCTTCTGCACCTGTTGGGTTGGAACAGGGGGTGGCTGGCCTGACCATCAGTTCTGCCCCTACTGCCCCGGCTGTACCTAATGTACTTCATACAGGTGTCCCAACTGTGCCACTGTTGCCTCCTCAAGTCAGTCCCTCAGTGGGTGGAGTTCCCCATATGAGCCCAGCCACCACGTTACCCGgCTTGATGCCATTGCCAGCAGGCCTACCCAACCTACCCAACCTGCCAAATTTGAATATCACTTTACCAAATCTCACTTCAGTTTCTTTAGCAGGAGTTGGAGGACTCCCATCGTCTACAGCAGGATTCGCGCCGCTCGCCCCACTGCCTCCCCTGAACCTGCCCGGGATAGCCCCCCTCTCAATGCCTACTGTATTCCCCACTCAGATGCCCCTTGTCACAGGCATAACGGCCCCCCCGTCTGAGTTTGCACCACCCGTAGTGTCGGTGGCACACGTAGAGCAGACTCCCGCCCTGATCCTGGACGCCACGGCCGCCTCCAAAGCACGGGCTCACGAAACCTCGACAGAGACGACGGTAACCAGTGAAACGCACTCTTCCGAGTCTACAGATGCACAGGTGTCTTCTGAATCCTCCTAACACTAAACTCTTAAATGTGGATGGATTTGtttagtatatttatttagccacaggagagaaacccaCATGATTGTGCAGTATAGGACAGAACAGCCAGCCCAGGAAGGTCCCGTTGGAGTCACGGGGGAATGAGAACAGATGAGGTTCAAGGAAGAGGTGAAATGGAGAGATTATACCCGAGTGTGTTAAAGGAAGCCTGCCAGCCAATTCCTATACAGCTTAGATTTAGGTGTATATTTCCCTcacgtttttattttcattttcatttaatctgaaCCGATCTACACCTGAGAATTTAAATTCTTTAACATGCATTCGGTGGAAGACTACTGTATGATGGTGAAGAggtgtcattttttgttttgttttttggttcttTAAATGgattgtaacatttttattacttattttttatttgtattaaatttagCATGTACATCGTGCATTTACATGTATAGTCTATTTTCCTTACTTTCTTTTGTCAATAAATAGAGGCCCTTGATTTCATGTAGGTGCTGGGTTACAGCATTCCACTTTACATTCGCTTGGAAAGATAGGCGATGAAATGAAATTGGTGTATAGCTGGAGGCCAGAAGGTGGCGCTGCAGGCCGCCTGTCTTGAAAAACGTTGTTCACATACTCAAGCAATAAACAAATGGAattttacactgtactggtCCAGCATTCATACTTTAGTTTCTCTTTCTTCATTGATGTTCAGAAATGATACCATTTGTTCGTATAGCTTTTCTGACCTATACTGTTCCTAACTCAAATCAGCATAGGGGTATTTTCCAATTAAACTTCTCCTCGATATAAAGTGCCAATCAAATCTTGAGATGAACAGTTGTAGagtgttttctgttctgaaaggcATGATGGGTATTTATACAAATCTTGATCACAGTTTTTGTTAATGGATTATTGTGGTACTGTGCATTCGTcctatcttttatttttttgctgtcaTTGCCTCCTGTTAAGAAGCCAGTGAGGGGTGTTTTTGATTGCATGTATATATTCcatgaaaatatattctgaTTATGCCGATAGTCATTTTAAAGTTCTGCATCTGTGTTGTTACATATTAATTTCAGATTGAATGTGACTTTTTGATTCGATCATTGTTTTCCACCATGAAGTTTCAGAACTGTCTTAGGGAAgcatgttaatttgttttctagtAAATACCAACATGTTAAAACAGTACGGTGTGATGATGCTGATTTTCTACTCCTGTGCATTTCCTGGGAGAAGTCTTTTCAGGAAATCTCAGTGCGATCTGCCATGGGAAGCAGCTATTCCAGCACAATCTGTATAGGGAACTGAGAACTGCACTGGAACTTGTAACGTGAAATGGCAGCCTAAATAACTCTAATTACACTGGATGTTATGTACTCCATGCTGAAATGAGTGAGCCCGGTGAATTGATGACAATGTATTGTACTGCACGGAGCTCCTcttactgtgtctgtgtgcgatCCCATAAGGAATGCACAAGTCaaagtttatttataatttgtcattcattaaaatgtacagaacacACTAGTTTTAACTTGCTGGCTCACGTCTTGTTCGGCTGCAGTGTACAAGTGTTCTGTGCAGTTGTTCAGGTGCCAGTGATGCGTAGCCTCGTCTCTGTACCGGTTTATGCCTTCAAAGCCAGTATCTTATATTCTGACCTTATGTATTTTGACAACTAATGGGTATGGGAATGCTGAAGTGCTGCAAAACAGGCTCATTAAAATTATGCTTGACTACACAGATTGCCAGTGGGGAAGGGAATGCACCTTATTAACTGTAATGATAATGGAATAATGTGCTGAGCATCCCACCACTGTATTCGCATATATATCGGGCTTTAGAGGTTTTTAGCATCCTGAATGATTTGGACAGTCTAGCCCAAGGGAGTTTCATCTCTCTTCTAAGTGTGGAGGTGTGTGTATTGCCACAGTACTGAACTCAAATTTCTCTGAGTATCAATCATAGCTGATTAAAGGACGAATATAGATCTATGTTGgcctttgttttggttttgatctGATTTAAGCATTACATGTTATTTGTCTTAATCCTCTTTtctatgattttgttttttagaaacCAATGTAGATTGACAGAAGAGCTCGCCTACTGCCTGACTTGTTTGCTGAAgtcagttattttgaattgacAGAACCCTACACAACTCTTGTCCGTGTACCTTCTCCTTAGTCTTAAGATTGGCTCTGATCTGAAGCTGCACAAGGAAGCCCCTGATTGACCAGACGTTTTTACATATCCTGTAACAGAgcgagagaaaaacagaaacattgtcTTCTATGTTCCAGAACTACAAGCCACGATGCCGTGACGTTCCGAGGTCATTCCCTGCAGCTCGGCCTGGTCGTTTTAAGCTGTCGCCTCTTTTTTTTGTGCATCTTCCCCttttctcctgctctctctgtttCTACAAAGGTCTACATATTTCTGAACAACAGATCcagatatttcatttaattgttttcagatgACCAGCTTGTTAGGTAATGTTCTCATCTCTTGTCAGCTCAGTCATGTACATCGCTTCTTTAGGAACCCACCGGTAGTTTTGATCTAGATGTCAATTTACAGCGGTAAATTAGGATTGCgttaacaaaacaaagcagaagcACTTTTGTGGTGCAAAGCTAAGTAATGTTTAATACGTTTTCTAAAGGAAGGAGTTTAGCTTAACTCCATAAAAAGAAATGTCCCTTTAAGTcagtatttttatgtaaaataaacctCAAGCTTAGGAGACTGTGTGTCAGTGATGTGCCTAATGTTGCTAAACGCCGGCCCCCGTTGTCAAGTGGCAGAGCCGGGCTGTCGGCGGATTCCCCCGGCGCTCCGCTGAGTGTGTGTTTCTAATCACTGTGGCAACTGTGTGCTGACACTGCCTCCTACTGTGTCCTTCCACTGAACATTAACTTCCCTCACacatcaatttaattaaaagcgAAAAACAAATTAGCATCGCGATCTCCGAATGAGCAGATACGTCTTCTCCACTTTGAGGCCGGGTTTCCTTAATAGCTGAATTTGTAGATTAttaggtttgtgtgtgtcacGCAGGGTTCGGCTCTGCATGTTTATGAGCCGTACGAGCAAGTGACGGTGTCTTCCCTGCGGGGAGGTTGCGCTGCACAGAGTGTGTTGGTGCTGTCGGAGGCAGGAGAATGGCATGCAGGAGGGGGCGGGATGCGTCAGATTGTGGCTACTGGGGATGCTGTGCTGCTCTTTGAACTGGTCTGGTTTGATGAGGGGGTGATGGTTTCTTCATGTacttctgtaaaaataaatttattttttttctttgcaatttgGCTTGTTTTTGCCATCAAAATCTTTTTCAGGTGTTCCTTCCTTGTAACAATGTCAAGTTCCCCATAACAGTTACTGACTGTTCAGTTCCCTACAGCTTTTCTGACCCCATTATATATTCCGTGGTACCCAGTGAAGGCGTTTTGAAAGGGTATGATTGAACGCAGCAGCTAATCACCATCttcattaacaatacatttaatttgtagttttttt

Function

symbol description
gorasp2 Predicted to be involved in Golgi organization. Predicted to be located in membrane. Predicted to be active in Golgi apparatus. Orthologous to human GORASP2 (golgi reassembly stacking protein 2).

NR:

description
PREDICTED: Golgi reassembly-stacking protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001010 True 5017 mRNA 0.45 10 12079998 12092059

Neighbor

gene id symbol gene type direction distance location
AMCG00001013 NA coding upstream 1101 12072503 ~ 12078897 (+)
AMCG00001003 gad1 coding upstream 17887 12040325 ~ 12062111 (+)
AMCG00001008 NA coding upstream 45382 12019805 ~ 12034616 (+)
AMCG00001009 sp5 coding upstream 62776 12014714 ~ 12017222 (+)
AMCG00001007 myo3b coding upstream 117301 11951375 ~ 11962697 (+)
AMCG00001012 NA coding downstream 49671 12141730 ~ 12149295 (+)
AMCG00001011 NA coding downstream 57803 12149862 ~ 12157026 (+)
AMCG00001018 dync1i2,LOC103355058,LOC106586225 coding downstream 79330 12171389 ~ 12191575 (+)
AMCG00001016 hat1,LOC106581768 coding downstream 128348 12220407 ~ 12236714 (+)
AMCG00001019 NA coding downstream 147660 12239719 ~ 12270756 (+)
G127774 atp5b,LOC107682211,LOC103355037,LOC102782720,LOC100705231,LOC102302090 non-coding upstream 337248 11671768 ~ 11742750 (+)
G127509 NA non-coding upstream 1635061 10442993 ~ 10444937 (+)
G127278 NA non-coding upstream 2702409 9363107 ~ 9377589 (+)
G127206 NA non-coding upstream 2997117 9081327 ~ 9082881 (+)
G127144 NA non-coding upstream 3440175 8638596 ~ 8639823 (+)
G127924 NA non-coding downstream 2082 12094141 ~ 12096863 (+)
G128074 LOC103479331,LOC106632289,LOC101486364 non-coding downstream 448022 12540081 ~ 12540318 (+)
G128101 NA non-coding downstream 513980 12606039 ~ 12655172 (+)
G128107 ola1,LOC107660044 non-coding downstream 546926 12638985 ~ 12676174 (+)
G128171 atp5g3,atp5g2,LOC101062993,LOC105908030 non-coding downstream 745592 12837651 ~ 12841008 (+)
AMCG00001002 myo3b other upstream 68573 11999664 ~ 12011425 (+)
AMCG00000949 NA other upstream 1925811 10100283 ~ 10154187 (+)
G127134 NA other upstream 3459803 8617199 ~ 8620195 (+)
AMCG00000848 NA other upstream 6614017 5461301 ~ 5465981 (+)
AMCG00000734 NA other upstream 10265841 1805407 ~ 1814157 (+)
AMCG00001022 NA other downstream 196891 12288950 ~ 12385042 (+)
AMCG00001098 NA other downstream 3058216 15150275 ~ 15184392 (+)
G128823 NA other downstream 3317053 15409112 ~ 15420880 (+)
AMCG00001114 NA other downstream 3368473 15460532 ~ 15463853 (+)
G129365 zgc:162707,LOC107749877,LOC107592986,LOC107668408,LOC107596553 other downstream 5931001 18023060 ~ 18044251 (+)

Expression


Co-expression Network