AMCG00001013


Basic Information

Item Value
gene id AMCG00001013
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 12072503 ~ 12078897 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001013
ATGTTCCTGGAAGATTGTCTGATCCGGTACCTTGATGACACGGCTGGGGACTCTGGACAGAGAGTACCCGTTATGAGCCCAGACTGCGACTCTTTGCTCTCCGAAGAGGAGCCTGCCGTGGGGCATGGTGGGGAGAAGGAGCTCCTGCAGTTTGCTCATTTCTGTTGTAAACTTCAAAAGGGATGTAGCAACAACAAGAGCATCCACAAAGGGGTATTGCTCAACAATAGCCTGCGGACAGAGTCTGGCTACTATCGGGAGAACATCGAATGGACCAAGGGATGCCAGTTGGGGGCTGGGAAGTTTGGATCTGTCTTTGAAGTTCATGACAATATGAAGAGATTACAAGGcaggacacagacacatatgGCCCCTGAAGTGGCCAGACAATCGGAGCACGACAGCAGGGCGGACGTGTGGAGCTGCACCTGTACCCTCCTCCACATGCTGAACGCCAGGCCTCCCTGGATCAAGAAATACCGTGAGCTGCCCTCATTGGATGTGGTGATTGCCAACAATAGCCCCCCACTGTTTGAAATCCCTGAGAGGTGCCACAAGGAGGTGAGGAGACTCATTGAGATGGGCCTCACAGTGGATCAGCACAAACGCCCCCAAGCAGGAGCTCTGCGGGATGAAGTCCATGCAGTCCTAACCAACATGTATCCGTCTCGCTCCTGCTTtgacaataacataaaaaaactaaaagacaacTCACCGTTGAGCTCTCCAGACCCATCTTCAATGTCAATAAATGAGCAGTCACCCAGTCTCAGCTCTACATTGCTTACCTTAATGGACAAGCCCACAGAGCCTGTTTTTGACTCAACATGGGACCTTGAAGCACATGGATCTAGTGGCAATGCAGTAAGAAAAGAAAGTGACAATGAGATCATCATAGCCTTCCACCGTGCACGCCTGTCAACATGCAACTCCACCGAGGACTTCGAAGACTGGCTGGAGATGGTGCAAAATGCTGACAACTGGCTGGATGATGAAGTAATGGATAAAGCCAACCCCACCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001013 True 1023 mRNA 0.51 8 12072503 12078897

Neighbor

gene id symbol gene type direction distance location
AMCG00001003 gad1 coding upstream 10392 12040325 ~ 12062111 (+)
AMCG00001008 NA coding upstream 37887 12019805 ~ 12034616 (+)
AMCG00001009 sp5 coding upstream 55281 12014714 ~ 12017222 (+)
AMCG00001007 myo3b coding upstream 109806 11951375 ~ 11962697 (+)
AMCG00001005 myo3b coding upstream 139404 11925325 ~ 11933099 (+)
AMCG00001010 gorasp2,LOC103354349,LOC106928304,LOC103129211,LOC105930246,LOC102238218 coding downstream 1101 12079998 ~ 12092059 (+)
AMCG00001012 NA coding downstream 62833 12141730 ~ 12149295 (+)
AMCG00001011 NA coding downstream 70965 12149862 ~ 12157026 (+)
AMCG00001018 dync1i2,LOC103355058,LOC106586225 coding downstream 92492 12171389 ~ 12191575 (+)
AMCG00001016 hat1,LOC106581768 coding downstream 141510 12220407 ~ 12236714 (+)
G127774 atp5b,LOC107682211,LOC103355037,LOC102782720,LOC100705231,LOC102302090 non-coding upstream 329753 11671768 ~ 11742750 (+)
G127509 NA non-coding upstream 1627566 10442993 ~ 10444937 (+)
G127278 NA non-coding upstream 2694914 9363107 ~ 9377589 (+)
G127206 NA non-coding upstream 2989622 9081327 ~ 9082881 (+)
G127144 NA non-coding upstream 3432680 8638596 ~ 8639823 (+)
G127924 NA non-coding downstream 15244 12094141 ~ 12096863 (+)
G128074 LOC103479331,LOC106632289,LOC101486364 non-coding downstream 461184 12540081 ~ 12540318 (+)
G128101 NA non-coding downstream 527142 12606039 ~ 12655172 (+)
G128107 ola1,LOC107660044 non-coding downstream 560088 12638985 ~ 12676174 (+)
G128171 atp5g3,atp5g2,LOC101062993,LOC105908030 non-coding downstream 758754 12837651 ~ 12841008 (+)
AMCG00001002 myo3b other upstream 61078 11999664 ~ 12011425 (+)
AMCG00000949 NA other upstream 1918316 10100283 ~ 10154187 (+)
G127134 NA other upstream 3452308 8617199 ~ 8620195 (+)
AMCG00000848 NA other upstream 6606522 5461301 ~ 5465981 (+)
AMCG00000734 NA other upstream 10258346 1805407 ~ 1814157 (+)
AMCG00001022 NA other downstream 210053 12288950 ~ 12385042 (+)
AMCG00001098 NA other downstream 3071378 15150275 ~ 15184392 (+)
G128823 NA other downstream 3330215 15409112 ~ 15420880 (+)
AMCG00001114 NA other downstream 3381635 15460532 ~ 15463853 (+)
G129365 zgc:162707,LOC107749877,LOC107592986,LOC107668408,LOC107596553 other downstream 5944163 18023060 ~ 18044251 (+)

Expression


Co-expression Network