AMCG00001189


Basic Information

Item Value
gene id AMCG00001189
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 18499105 ~ 18505130 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001189
ATGGCGGTGCCGCAGCGTGTGCAGGACCTGCTGACCCCCGCCCTGGTGCTGGACCTGCCCCAGCTCAGGAGCAACGCACGGCTGATGGCGGACAGGTTCAGCCAGCAGGGAGTCCAGCTGCGACCGCACATGAAAACCCATAAAACCGTGGAAGGCGGGGAGATCATGACCGCTGGCACACGCCGGTGCATCGTGGTGTCCACCCTGGCTGAAGCCTTCTTTTACGCCGAGAACGGCTTTGACGACATCCTGTACGCCTACCCGCTGCCCTTCGACAAGCTGGACAGGTGTGCAGAGCTGGCCCAGCGCCTCGAGCTCTTCCAGGTGCTGGTGGACAGCGAGGCGGCCCTGGCCGAGCTGAAGAAGCACCCACTGCAGGGAGGCAGAGTGTGGCACACTTGGCTCAAGCTGAACTGCGAAAATGGTCGAGcgGGAATTCCTCACAGCGACCCTGCAGCTCTTCAACTAGCCAAAGCCATTTCGCAGAGCGAGAGCGTGGAGCTGACTGGGGTGTATGCCCACTGTGGAAACTCCTACCACTGCTCTGGAGGAGAGGAAATTAAAGCTGTAGCCCAGGCAACTACTACAGCAACACTGCAGTTTATGGAGAAACTGAAGGCTGCAGGCATTCACGGTGTTAAGTCTAGCATCGGCTCCACTCCTTCCTGCAGTCACCCTGTCCCAGACATGGCTTTGCTAAGTGAGGTGCATCCTGGGAATTATGTGTTCTATGATATACAGCAGACTCTAATTGGCTCTTGCAAGATAGAGGAGGTTGCTGTGAGGGTGCTGACCCGGGTTATTGGTCACTACCCTGCCACGAACCAGCTGCTGGTGGACTGTGGCTGGACCGCCCTGAGTCTGGATGGCATGGGCCGCCTCCCCACTGGCTACGCTGTGATCGAAGGGCATCCTGAACTGAAATTGCTCTCCATGACTCAGGAGCACGGAAAAGTTGAACCAGTCTCTGGGAAACTCGATTATGAAAAATTCCCTTTGGGTTCCCTCCTCTCTCTTATTCCTTACCACGCATGTGCCACAGCTGCGATGCACCCGGTCTATTTCGTTCAATCGGAAGGAAGGATTGTGGACACTTGGACACCAACCCGGGGC

Function

GO: NA

KEGG:

id description
K20498 DSD1; D-serine ammonia-lyase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001189 True 1113 mRNA 0.57 7 18499105 18505130

Neighbor

gene id symbol gene type direction distance location
AMCG00001188 NA coding upstream 4504 18462098 ~ 18494601 (+)
AMCG00001190 NA coding upstream 88051 18374499 ~ 18411054 (+)
AMCG00001191 NA coding upstream 152047 18324606 ~ 18347058 (+)
AMCG00001186 NA coding upstream 198899 18267076 ~ 18300206 (+)
AMCG00001184 NA coding upstream 246638 18237931 ~ 18252467 (+)
AMCG00001195 NA coding downstream 274804 18779934 ~ 18784243 (+)
AMCG00001202 NA coding downstream 386802 18891932 ~ 18907617 (+)
AMCG00001207 dip2a coding downstream 477150 18982280 ~ 19039418 (+)
AMCG00001212 NA coding downstream 589027 19094157 ~ 19094534 (+)
AMCG00001210 NA coding downstream 618932 19124062 ~ 19130277 (+)
G129343 NA non-coding upstream 522169 17972009 ~ 17976936 (+)
G129255 NA non-coding upstream 806579 17691507 ~ 17692526 (+)
G129221 NA non-coding upstream 948314 17487392 ~ 17550791 (+)
G129080 NA non-coding upstream 1352036 17144190 ~ 17147069 (+)
G129071 NA non-coding upstream 1606744 16889638 ~ 16892361 (+)
G129552 NA non-coding downstream 291720 18796850 ~ 18802040 (+)
G129597 NA non-coding downstream 583018 19088148 ~ 19090238 (+)
G129609 NA non-coding downstream 600582 19105712 ~ 19108737 (+)
G129674 arl4c,LOC105900932,LOC103482382,LOC105937943 non-coding downstream 867893 19373023 ~ 19377913 (+)
G129689 NA non-coding downstream 1132472 19637602 ~ 19653509 (+)
G129365 zgc:162707,LOC107749877,LOC107592986,LOC107668408,LOC107596553 other upstream 454854 18023060 ~ 18044251 (+)
AMCG00001114 NA other upstream 3035252 15460532 ~ 15463853 (+)
G128823 NA other upstream 3078225 15409112 ~ 15420880 (+)
AMCG00001098 NA other upstream 3314713 15150275 ~ 15184392 (+)
AMCG00001022 NA other upstream 6114063 12288950 ~ 12385042 (+)
G129453 NA other downstream 40763 18545893 ~ 18547915 (+)
G129442 NA other downstream 50021 18555151 ~ 18558174 (+)
AMCG00001203 NA other downstream 383154 18888284 ~ 18889724 (+)
G129594 bzw1a,LOC108414345,LOC105905677,LOC103358003 other downstream 538174 19043304 ~ 19142145 (+)
AMCG00001223 s100b,LOC106574292 other downstream 973130 19478260 ~ 19492344 (+)

Expression


Co-expression Network