Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00001203 |
| gene name | NA |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030137.1 |
| NCBI id | CM030137.1 |
| chromosome length | 27060302 |
| location | 18888284 ~ 18889724 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0022900 | electron transport chain | biological_process |
| GO:0005747 | mitochondrial respiratory chain complex I | cellular_component |
| id | description |
|---|---|
| K03959 | NDUFB3; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00001203 | True | 691 | mRNA | 0.47 | 3 | 18888284 | 18889722 |
| TU162456 | False | 586 | TUCP | 0.51 | 3 | 18888391 | 18889724 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00001195 | NA | coding | upstream | 104041 | 18779934 ~ 18784243 (+) |
| AMCG00001189 | NA | coding | upstream | 383154 | 18499105 ~ 18505130 (+) |
| AMCG00001188 | NA | coding | upstream | 393683 | 18462098 ~ 18494601 (+) |
| AMCG00001190 | NA | coding | upstream | 477230 | 18374499 ~ 18411054 (+) |
| AMCG00001191 | NA | coding | upstream | 541226 | 18324606 ~ 18347058 (+) |
| AMCG00001202 | NA | coding | downstream | 2208 | 18891932 ~ 18907617 (+) |
| AMCG00001207 | dip2a | coding | downstream | 92556 | 18982280 ~ 19039418 (+) |
| AMCG00001212 | NA | coding | downstream | 204433 | 19094157 ~ 19094534 (+) |
| AMCG00001210 | NA | coding | downstream | 234338 | 19124062 ~ 19130277 (+) |
| AMCG00001209 | NA | coding | downstream | 243311 | 19133035 ~ 19138617 (+) |
| G129552 | NA | non-coding | upstream | 86244 | 18796850 ~ 18802040 (+) |
| G129343 | NA | non-coding | upstream | 911348 | 17972009 ~ 17976936 (+) |
| G129255 | NA | non-coding | upstream | 1195758 | 17691507 ~ 17692526 (+) |
| G129221 | NA | non-coding | upstream | 1337493 | 17487392 ~ 17550791 (+) |
| G129080 | NA | non-coding | upstream | 1741215 | 17144190 ~ 17147069 (+) |
| G129597 | NA | non-coding | downstream | 198424 | 19088148 ~ 19090238 (+) |
| G129609 | NA | non-coding | downstream | 215988 | 19105712 ~ 19108737 (+) |
| G129674 | arl4c,LOC105900932,LOC103482382,LOC105937943 | non-coding | downstream | 483299 | 19373023 ~ 19377913 (+) |
| G129689 | NA | non-coding | downstream | 747878 | 19637602 ~ 19653509 (+) |
| G129695 | NA | non-coding | downstream | 891526 | 19781250 ~ 19781607 (+) |
| G129442 | NA | other | upstream | 330110 | 18555151 ~ 18558174 (+) |
| G129453 | NA | other | upstream | 340369 | 18545893 ~ 18547915 (+) |
| G129365 | zgc:162707,LOC107749877,LOC107592986,LOC107668408,LOC107596553 | other | upstream | 844033 | 18023060 ~ 18044251 (+) |
| AMCG00001114 | NA | other | upstream | 3424431 | 15460532 ~ 15463853 (+) |
| G128823 | NA | other | upstream | 3467404 | 15409112 ~ 15420880 (+) |
| G129594 | bzw1a,LOC108414345,LOC105905677,LOC103358003 | other | downstream | 153580 | 19043304 ~ 19142145 (+) |
| AMCG00001223 | s100b,LOC106574292 | other | downstream | 588536 | 19478260 ~ 19492344 (+) |
| AMCG00001229 | NA | other | downstream | 1574639 | 20464363 ~ 20496368 (+) |
| AMCG00001236 | LOC105905668,LOC108414761 | other | downstream | 1721548 | 20611272 ~ 20676857 (+) |
| AMCG00001241 | NA | other | downstream | 2016647 | 20906371 ~ 20925240 (+) |
