AMCG00001248


Basic Information

Item Value
gene id AMCG00001248
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 21115275 ~ 21118948 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001248
ATGGACGTCGCCGTGTCGGTTTCACTGCTGAAAGACCAGCTCGGCTCCGTCATCGAGCACGCCGTCAGAGCCGCCGTGGAGATGGTGCTGACCGAGATGGCGACGCTGATGGGCAGCAAATTTGAGGACATCAGGAAAGAAATGAAAGCCAAAGAAAAGGAGAACGAGAGCATGAAGCAGATGCTGGAGATCTCCCGGTGTCAGATGAAAACGCTGCGGAAATACATGAGTGCAGTGGGCGCCAAAGACGAGCGTCACGCCGCCACCCCGAGGAAGAGCTGGAAAGAGCCGGAGCCGCACAGACACTACTGCCCTGACGTCGCGGCACCGCTGGCGCTGAAGAGGACCAGGAAAGAGCCGGGCACCGCCGCGTTTAGTAAGACCATGAAGGATCTGCTGGAGAGCAATGCCTGCGTCTCTCCCATTGCTCTGCAGACACAGCGGTGTGGGGGTGCCCTGCCAGATGTTAGCAGCCGCACAGTGCCGGGCAGATGTTCAGGAGCTCCAGCATCGAGCCCAGCTCAGATAGACCCGCACCAGCCCTGCCGTACTGGCGACACGACAGACGGGACCCGAGTTAAAGAAGAGAGCAGAGATGTTGCAGACGCTGAAGGAGCGGCCCAGAGAAACACAGCGGAGCACCAGGAGCCGCTGTCTGAGAAGGATAGGGGTGCAGGTGGAAAGGGGGCTACTGAGGGGACACCCTctgaggtcaaaggtcaggaGTCCCCAAAGCATTACAGCCCTGTCGTAGATCCAGAACTGGGGAGTGTTCGTATTAAAGAAGAAGTGGCTGAAATAGAAACCGTCTGTATTAAAGAGGAGCCAGATGAAGCCGGCCACACGTCACAGGGCCAGTGCGCTGATGCTTGTGCCCTGGACTCTCTGGGATTCATAAAGGATGAATGCCATGTCCCTCAGTCAAGACTGGAAGAAGGATCCACAGCTTCTGTGCGCTTTACTAATTATTCAAACCTGCCTGTGTCagatgcagacagacaggcgcGCCGACGGCAGAAGCTTAAGGAAATGAAACTGTATGATGAGTACAAGAAGAGAAATGCCAAGCAGCAGAGGCAGAGCCAAAGTATGAGGAGGGAGCTGGAGAAAACGTTGCCCAAAGCTATGCAGAATGTGTTGCAGAGGGAGAGACGAGAGAAGACTAGAATACGTGTAGCCAAGTGGAGAGCGCTGAGGAAGCAGAGTAGTGCAGCAGCCGATTCACCCAtgtgtcagtcagccagtcCGCGCCAGCCAGGCATGGCACTGAAGAGCCTGGCATGGTTTCTCACCGCAGAGCCAGGGCCCAGCAGCTCGCACCAAGCGTAA

Function

GO:

id name namespace
GO:0006814 sodium ion transport biological_process

KEGG:

id description
ko04911 Insulin secretion

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001248 True 1329 mRNA 0.56 3 21115275 21118948

Neighbor

gene id symbol gene type direction distance location
AMCG00001243 gls,LOC105022419,LOC102789803 coding upstream 119813 20968716 ~ 20995462 (+)
AMCG00001239 NA coding upstream 243632 20858612 ~ 20871643 (+)
AMCG00001238 NA coding upstream 258931 20847770 ~ 20856344 (+)
AMCG00001240 NA coding upstream 271048 20843118 ~ 20844227 (+)
AMCG00001235 NA coding upstream 336629 20749802 ~ 20778646 (+)
AMCG00001250 LOC105905614 coding downstream 62689 21181637 ~ 21203572 (+)
AMCG00001249 abcb6a,abcb6 coding downstream 105657 21224605 ~ 21226842 (+)
AMCG00001252 cnppd1 coding downstream 185325 21304273 ~ 21315646 (+)
AMCG00001253 ttll4,LOC102787029 coding downstream 200522 21319470 ~ 21340288 (+)
AMCG00001254 LOC108266105,LOC107596559,LOC107738101,LOC107752899 coding downstream 224919 21343867 ~ 21353441 (+)
G129756 NA non-coding upstream 518523 20596431 ~ 20596752 (+)
G129719 NA non-coding upstream 809418 20305643 ~ 20305857 (+)
G129708 LOC107575789 non-coding upstream 1020208 19995027 ~ 20095067 (+)
G129696 NA non-coding upstream 1333413 19781647 ~ 19781862 (+)
G129695 NA non-coding upstream 1333668 19781250 ~ 19781607 (+)
G129904 NA non-coding downstream 122389 21241337 ~ 21241568 (+)
G129961 NA non-coding downstream 289986 21408934 ~ 21409691 (+)
G129972 LOC106582529,LOC105005782 non-coding downstream 337071 21456019 ~ 21456860 (+)
G129984 NA non-coding downstream 422515 21541463 ~ 21541672 (+)
G129985 NA non-coding downstream 432482 21551430 ~ 21554095 (+)
G129877 NA other upstream 36405 21077135 ~ 21078870 (+)
G129843 LOC107575789 other upstream 172878 20942072 ~ 20942397 (+)
AMCG00001241 NA other upstream 190035 20906371 ~ 20925240 (+)
AMCG00001236 LOC105905668,LOC108414761 other upstream 438418 20611272 ~ 20676857 (+)
AMCG00001229 NA other upstream 618907 20464363 ~ 20496368 (+)
G129913 NA other downstream 152436 21271384 ~ 21276879 (+)
AMCG00001260 NA other downstream 852351 21971299 ~ 21992332 (+)
AMCG00001269 trak2,LOC107582328,LOC106573853 other downstream 1070960 22189908 ~ 22238654 (+)
AMCG00001278 ercc3,LOC107706662 other downstream 1381087 22500035 ~ 22530836 (+)
G130335 NA other downstream 2047315 23166263 ~ 23166656 (+)

Expression


Co-expression Network