AMCG00001300


Basic Information

Item Value
gene id AMCG00001300
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 23903328 ~ 23913809 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001300
ATGGGATGCCCTCTACAGCCCAGTCTCCAGAAGGAGGCGGAGACTCCACTGAAGGACATTTCTTGGGCCTGTGCGGTGGGCCACAGCTACTCTTGGGAAATTCAGGAGGCAGACAAGACTGGAGCCTGGGAGAAGGGGGTCAGGGCCCAGACGTCTGCTGTGGCCGATGGGGATGTGGACTTACAGGGAGATGGAGATAAAGCCAGCAATTGTGCAAAGCAGCCGCCAGATCATACACAGTCCTCCTGTCCTTCTTGCACAGCAGATCACAAGGGAGCTCAGAGTCCTCCCTGCAAAAGAAGGGTGCTTTCCCTTCATTCATCCGCTGCACAGGCGATAATGTTGCAATGTGTGCCAGACTGGCACTGCAGCCCAGCTATGACAGCCTTATTGAAGCTGCCTGCAGTCACAGGTTCAGGTCAGCTCCACAAAGAGGAGGAAGGGGTTTCAACTGAGACGGGGGGATCTGAGGAGATGCAGTGCAGTGAAAAGGCTAAGGATGAAAGTGCCGCTTGGTACAGTCCTGAAGATGAGGAAAAAGTTCTATCAGATAGCCCTGCTTCAGGCGTTGTTGTAGAACAGACAAGCTTGGACGCCAACGAGAGCCAGAGGACCCCCCAGACAAAAACGCCACGGACCCAGGTCCTGAACTCTTACACATTTTCACTCTCCAGTGTCCCCCTGGCCGCTGTCCTCCACAACCCACTTCACTTGCCAGCGCCTCTGGTTCCCTCCCCCACTGCTCCCGACTCCCAGCCTCTGCCTTCCAACTGCAGTGGTTCCCCTGACCCCCAGCCCCTCGCTCCTTCCCAGAATGCAGCAGTCCCCGGCAGCACGCCAGCACCCCCAGAGTGCTCTACTGCATTTGCAGATGTTGAGAGCCTGCTTCGCTTGTCCTTCAACAAAAAACGGAGAACATACCAGGTCACCACAGATGAAGTCAAAAGACGGATAGGGCCACCAGAAAACATGTCCGCAAGCAGCTTGCTGTCTTACTTAAGggtggataaaaacaagaaggcTGAGATTAAGGAAAAAGTGGAGCAGACTCTCGGGGAAGCTGTCGATTTAAGCAAGAATTTAGAGAAGCTGTCTGAAATGCTGATTCCCTTTGACAAAATTGTTGTCGTGGACACCCTTGTGAACAGCAAGCATATCGCCCTGGGGAAGCTGCAGGAGTTCAGGGAGACACTACAGAGGGCCACAGACAGTGTTATAGAGCACTCTGAGGACTTCGAGAAAGCCACCCATGGCCTGGGATTCCACCTGCTCAATGTGTGTGCGTCTATCCTGGACAAATGTGTCACATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001300 True 1311 mRNA 0.54 7 23903328 23913809

Neighbor

gene id symbol gene type direction distance location
AMCG00001294 ino80d,LOC106582458 coding upstream 144259 23721823 ~ 23759069 (+)
AMCG00001285 NA coding upstream 783373 23100907 ~ 23119955 (+)
AMCG00001284 NA coding upstream 869829 23031304 ~ 23033499 (+)
AMCG00001279 NA coding upstream 1150472 22646113 ~ 22752856 (+)
AMCG00001276 NA coding upstream 1296073 22584027 ~ 22607255 (+)
AMCG00001298 NA coding downstream 34640 23948449 ~ 23990082 (+)
AMCG00001297 tmem198a coding downstream 158620 24072429 ~ 24090849 (+)
AMCG00001299 dnpep,LOC106573845 coding downstream 266441 24180250 ~ 24207621 (+)
AMCG00001309 NA coding downstream 343027 24256836 ~ 24286635 (+)
AMCG00001302 ptprn,ptprnb,LOC107748541 coding downstream 408862 24322671 ~ 24351647 (+)
G130492 NA non-coding upstream 47212 23855720 ~ 23856116 (+)
G130461 NA non-coding upstream 174099 23729005 ~ 23729229 (+)
G130365 LOC107575789,LOC100846954 non-coding upstream 621994 23280811 ~ 23281334 (+)
G130348 NA non-coding upstream 678731 23224032 ~ 23224597 (+)
G130346 NA non-coding upstream 685828 23214937 ~ 23217500 (+)
G130531 NA non-coding downstream 9402 23923211 ~ 23923877 (+)
G130530 NA non-coding downstream 11069 23924878 ~ 23926011 (+)
G130552 NA non-coding downstream 139013 24052822 ~ 24120461 (+)
G130648 NA non-coding downstream 837310 24751119 ~ 24751414 (+)
G130684 NA non-coding downstream 1108870 25022679 ~ 25023049 (+)
AMCG00001292 ndufs1,LOC107555450,LOC107748553 other upstream 218207 23565151 ~ 23685121 (+)
G130335 NA other upstream 736672 23166263 ~ 23166656 (+)
AMCG00001278 ercc3,LOC107706662 other upstream 1372492 22500035 ~ 22530836 (+)
AMCG00001269 trak2,LOC107582328,LOC106573853 other upstream 1664674 22189908 ~ 22238654 (+)
AMCG00001260 NA other upstream 1910996 21971299 ~ 21992332 (+)
AMCG00001312 tuba4a,tuba8l4,tba1a,si:ch211-114n24.6,LOC108251627,LOC107714908 other downstream 510756 24424565 ~ 24446233 (+)
G130616 si:ch211-114n24.6,LOC107581306,LOC108436424,LOC101061790,LOC103034569 other downstream 519984 24433793 ~ 24454385 (+)
AMCG00001315 NA other downstream 670370 24584179 ~ 24606472 (+)
AMCG00001331 NA other downstream 1509878 25423687 ~ 25450310 (+)
AMCG00001337 sumo1 other downstream 1821746 25735555 ~ 25749501 (+)

Expression


Co-expression Network