AMCG00001314


Basic Information

Item Value
gene id AMCG00001314
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 24568365 ~ 24576371 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001314
ATGGAGAAGTCTAAAAACTTTCGGATCGATGCCCTCCTGGCGGACGAGGCTCCCAGAGCAGCTCCCGGCGCCTCCTCCCCGGGGTTGAGTTTAGACAGTCCTGGCAGTAGCCCCATCTCCTGCCTCAGGACGGAGACCCCCTCGCCCCGTGCAACACCTGGAGCAATGCAGCTTCAAACGGGGATTATCCCTAAACCGGGTCTTCTCCACCTGCCGCACCCAGGACTGGCTTCATTGCCGCAGGGAGCGATCCCCGGCATGTACCCCGCGCCCATGTACCCGATCTCCGCATTGGGAAGCCAGCATCCAGCATTTACCTATGCGGGCTTCTCGCACCTGACGCAGCCGTACCCGGAGCACCTGAAGGTGGCTGCGGCAGCGGGGTCCTTCCCACTGGAGCACTGGATCCGGGCCGGCATCATGGTACCTCGGCTACCGGACTACAACACTGCCCCGCAATCTGGCCTGATGGGGAAATGTAGACGACCTCGGACAGCGTTTACCAGCCAGCAGCTACTGGAGTTGGAGAACCAGTTCAAACTCAACAAGTACCTGTCCCGGCCGAAGCGCTTTGAGGTGGCCACCTCGCTGATGCTGACAGAGACCCAGGTGGACAAACCCGGGGAGAGCCGTGGGTCCCTGGGGGAAAGAggagtggaggaggaagaggaggaggaagaggaggaggaagaagaagaggcaGCTCACAGGGAATTCAGCAGCAGCTTGGGCCATCCCACAGACTACCTACAACACACCACAGACCTAAACTACAGCCCCCACAGCTCATATTCTGAAGATGAGCTGGGAGAAGGGGCCAATGACAGGAAAATTGGGGCTGGTTTGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001314 True 849 mRNA 0.60 3 24568365 24576371

Neighbor

gene id symbol gene type direction distance location
AMCG00001310 stk16,LOC107676064,LOC107674016,LOC107750071,LOC107750290 coding upstream 65990 24496658 ~ 24502375 (+)
AMCG00001311 tuba8l2,LOC108411703,LOC103042625,LOC107750365 coding upstream 77729 24480969 ~ 24490636 (+)
AMCG00001313 si:ch211-114n24.6,LOC106598125,LOC107581392,LOC107659949,LOC108433351,LOC103467923,LOC102313992,LOC104949664,LOC106573846 coding upstream 113236 24447621 ~ 24455129 (+)
AMCG00001302 ptprn,ptprnb,LOC107748541 coding upstream 216718 24322671 ~ 24351647 (+)
AMCG00001309 NA coding upstream 281730 24256836 ~ 24286635 (+)
AMCG00001317 NA coding downstream 69481 24645852 ~ 24659929 (+)
AMCG00001319 NA coding downstream 126272 24702643 ~ 24861705 (+)
AMCG00001322 NA coding downstream 453532 25029903 ~ 25044812 (+)
AMCG00001324 NA coding downstream 543265 25119636 ~ 25146056 (+)
AMCG00001329 NA coding downstream 573926 25150297 ~ 25150756 (+)
G130552 NA non-coding upstream 447904 24052822 ~ 24120461 (+)
G130530 NA non-coding upstream 642354 23924878 ~ 23926011 (+)
G130531 NA non-coding upstream 644488 23923211 ~ 23923877 (+)
G130492 NA non-coding upstream 712249 23855720 ~ 23856116 (+)
G130461 NA non-coding upstream 839136 23729005 ~ 23729229 (+)
G130648 NA non-coding downstream 174748 24751119 ~ 24751414 (+)
G130684 NA non-coding downstream 446308 25022679 ~ 25023049 (+)
G130689 NA non-coding downstream 480250 25056621 ~ 25056978 (+)
G130692 NA non-coding downstream 510290 25086661 ~ 25086898 (+)
G130695 NA non-coding downstream 547223 25123594 ~ 25126079 (+)
G130616 si:ch211-114n24.6,LOC107581306,LOC108436424,LOC101061790,LOC103034569 other upstream 113980 24433793 ~ 24454385 (+)
AMCG00001312 tuba4a,tuba8l4,tba1a,si:ch211-114n24.6,LOC108251627,LOC107714908 other upstream 122132 24424565 ~ 24446233 (+)
AMCG00001292 ndufs1,LOC107555450,LOC107748553 other upstream 883244 23565151 ~ 23685121 (+)
G130335 NA other upstream 1401709 23166263 ~ 23166656 (+)
AMCG00001278 ercc3,LOC107706662 other upstream 2037529 22500035 ~ 22530836 (+)
AMCG00001315 NA other downstream 7808 24584179 ~ 24606472 (+)
AMCG00001331 NA other downstream 847316 25423687 ~ 25450310 (+)
AMCG00001337 sumo1 other downstream 1159184 25735555 ~ 25749501 (+)
AMCG00001361 NA other downstream 2280228 26856599 ~ 26880797 (+)
AMCG00001365 NA other downstream 2327992 26904363 ~ 26954597 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000299_02723315_02728716 MNX2B coding CI01000299 null 2723220 ~ 2728753 (-)