AMCG00001317


Basic Information

Item Value
gene id AMCG00001317
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 24645852 ~ 24659929 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001317
ATGGCCCGCTATGAGTTTTATTGGAGTCCAAGGCAGGTGATAGCAGGGGCTCAGAGCCTGTGCCAGGTGAATGCACAAGGCGTGTACCCCATGCTCACTGTTAGCGATGCGCGCAGCTCCGGCAGTATTGAGGGCATCAGCAAACTGCAGCTCTGGAGTCTCTTCTCCCTGGAGACCCTCAACTCCTACCTGCAGAGAGACCCCACTCCCACAGAGCTCATCTACAGAGTGCCCACCCGACACAGagatgaggaagaggaagaggaagaagaggaggggCCCTGGAAGTGGACTACCTTGGGCTGCGTAGAGGGCTTGGTGTCTCTGTCCATCACAGTGAACTCATTcttctgtctctccttctccagctcccACTGCTGCAGTTCTGATCTGTACTGTGTCAGGGCGCCTCCTGTGGTCACCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001317 True 426 mRNA 0.57 3 24645852 24659929

Neighbor

gene id symbol gene type direction distance location
AMCG00001314 NA coding upstream 69481 24568365 ~ 24576371 (+)
AMCG00001310 stk16,LOC107676064,LOC107674016,LOC107750071,LOC107750290 coding upstream 143477 24496658 ~ 24502375 (+)
AMCG00001311 tuba8l2,LOC108411703,LOC103042625,LOC107750365 coding upstream 155216 24480969 ~ 24490636 (+)
AMCG00001313 si:ch211-114n24.6,LOC106598125,LOC107581392,LOC107659949,LOC108433351,LOC103467923,LOC102313992,LOC104949664,LOC106573846 coding upstream 190723 24447621 ~ 24455129 (+)
AMCG00001302 ptprn,ptprnb,LOC107748541 coding upstream 294205 24322671 ~ 24351647 (+)
AMCG00001319 NA coding downstream 42714 24702643 ~ 24861705 (+)
AMCG00001322 NA coding downstream 369974 25029903 ~ 25044812 (+)
AMCG00001324 NA coding downstream 459707 25119636 ~ 25146056 (+)
AMCG00001329 NA coding downstream 490368 25150297 ~ 25150756 (+)
AMCG00001330 NA coding downstream 490835 25150764 ~ 25164833 (+)
G130552 NA non-coding upstream 525391 24052822 ~ 24120461 (+)
G130530 NA non-coding upstream 719841 23924878 ~ 23926011 (+)
G130531 NA non-coding upstream 721975 23923211 ~ 23923877 (+)
G130492 NA non-coding upstream 789736 23855720 ~ 23856116 (+)
G130461 NA non-coding upstream 916623 23729005 ~ 23729229 (+)
G130648 NA non-coding downstream 91190 24751119 ~ 24751414 (+)
G130684 NA non-coding downstream 362750 25022679 ~ 25023049 (+)
G130689 NA non-coding downstream 396692 25056621 ~ 25056978 (+)
G130692 NA non-coding downstream 426732 25086661 ~ 25086898 (+)
G130695 NA non-coding downstream 463665 25123594 ~ 25126079 (+)
AMCG00001315 NA other upstream 39380 24584179 ~ 24606472 (+)
G130616 si:ch211-114n24.6,LOC107581306,LOC108436424,LOC101061790,LOC103034569 other upstream 191467 24433793 ~ 24454385 (+)
AMCG00001312 tuba4a,tuba8l4,tba1a,si:ch211-114n24.6,LOC108251627,LOC107714908 other upstream 199619 24424565 ~ 24446233 (+)
AMCG00001292 ndufs1,LOC107555450,LOC107748553 other upstream 960731 23565151 ~ 23685121 (+)
G130335 NA other upstream 1479196 23166263 ~ 23166656 (+)
AMCG00001331 NA other downstream 763758 25423687 ~ 25450310 (+)
AMCG00001337 sumo1 other downstream 1075626 25735555 ~ 25749501 (+)
AMCG00001361 NA other downstream 2196670 26856599 ~ 26880797 (+)
AMCG00001365 NA other downstream 2244434 26904363 ~ 26954597 (+)

Expression


Co-expression Network