AMCG00001322


Basic Information

Item Value
gene id AMCG00001322
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 25029903 ~ 25044812 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001322
ATGGCATCGAAACTTCCAGCAAAAAATCCCAAAATATACTTTGGTCATTACCAACCTGAATGGGAGACTGACCAGGAGTTCCAGAAGATGATCACTAGTTCAGAAGAAGGAAGAGAATTCGCTTATTGTAAAGCATGTAGGAAGTTTGTGAAAGTTTCAGCATCTGGCCGATTCTACGTTGTGAGACATTTTCAAACGGAAACACACAAGCGTGCAGTTCAAAAATCGAAGCAGCATATACCCATCGATCAGCAATTTCGACAGCAAAACAAGAATACGAATTTTGACCGATGTGTGACAGAGGCCGAGTTACTTTTTTGCAAGTCTTTGGTGGATCATAATTTGCCATCGACCACCGCTGACCATTTCACTGATTTAGTCAGGGAAATGTTTCCTGACTCGAAATCTGCCACTGCCTTCGCCTGCAAACGAACCAAGGCCACCCAGATTGTCAAAAGGTGCCTCTTGACAGAGCTAACAACTCCTATTCTTGAAAGCTGTAGAAATGGACCATTTTCGTTACTCATCGATTCAACTAACGACAAGAATTATGATAAACACCTGGAGTCAGGAACAAACACCAAGATCCTTGACCTTCCAGTGCTTTCTGGAGGGACAGCAGAGGATGTGTTTGCTGCAGTTGCCACAGTGATTGATGGGCAGAATATTCCCTGGAAGAACATGGTCGGATTTACTAGTGACAACTGCAACGTGATGATGGGACAGCACAACTCCGTCCTGTCACGTCTGCGAGAGAAGAACCCGGATATTTTCACCCTTGGCTGCAACCTCTGCGCTAAAGCTGCCATCAAGGTGATGTCTGTTCCAGTGGATGACATCTTGATTGACATCTACTGCTTCTTTGAGCACAGTGTGAAGGACTATGTGCAACATTATACGAAACATTACGATGGAGACAGGTag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001322 True 924 mRNA 0.44 4 25029903 25044812

Neighbor

gene id symbol gene type direction distance location
AMCG00001319 NA coding upstream 168198 24702643 ~ 24861705 (+)
AMCG00001317 NA coding upstream 369974 24645852 ~ 24659929 (+)
AMCG00001314 NA coding upstream 453532 24568365 ~ 24576371 (+)
AMCG00001310 stk16,LOC107676064,LOC107674016,LOC107750071,LOC107750290 coding upstream 527528 24496658 ~ 24502375 (+)
AMCG00001311 tuba8l2,LOC108411703,LOC103042625,LOC107750365 coding upstream 539267 24480969 ~ 24490636 (+)
AMCG00001324 NA coding downstream 74824 25119636 ~ 25146056 (+)
AMCG00001329 NA coding downstream 105485 25150297 ~ 25150756 (+)
AMCG00001330 NA coding downstream 105952 25150764 ~ 25164833 (+)
AMCG00001325 NA coding downstream 201564 25246376 ~ 25296858 (+)
AMCG00001328 NA coding downstream 254284 25299096 ~ 25302688 (+)
G130684 NA non-coding upstream 6854 25022679 ~ 25023049 (+)
G130648 NA non-coding upstream 278489 24751119 ~ 24751414 (+)
G130552 NA non-coding upstream 909442 24052822 ~ 24120461 (+)
G130530 NA non-coding upstream 1103892 23924878 ~ 23926011 (+)
G130531 NA non-coding upstream 1106026 23923211 ~ 23923877 (+)
G130689 NA non-coding downstream 11809 25056621 ~ 25056978 (+)
G130692 NA non-coding downstream 41849 25086661 ~ 25086898 (+)
G130695 NA non-coding downstream 78782 25123594 ~ 25126079 (+)
G130705 NA non-coding downstream 151570 25196382 ~ 25196991 (+)
G130711 NA non-coding downstream 170413 25215225 ~ 25215735 (+)
AMCG00001315 NA other upstream 423431 24584179 ~ 24606472 (+)
G130616 si:ch211-114n24.6,LOC107581306,LOC108436424,LOC101061790,LOC103034569 other upstream 575518 24433793 ~ 24454385 (+)
AMCG00001312 tuba4a,tuba8l4,tba1a,si:ch211-114n24.6,LOC108251627,LOC107714908 other upstream 583670 24424565 ~ 24446233 (+)
AMCG00001292 ndufs1,LOC107555450,LOC107748553 other upstream 1344782 23565151 ~ 23685121 (+)
G130335 NA other upstream 1863247 23166263 ~ 23166656 (+)
AMCG00001331 NA other downstream 378875 25423687 ~ 25450310 (+)
AMCG00001337 sumo1 other downstream 690743 25735555 ~ 25749501 (+)
AMCG00001361 NA other downstream 1811787 26856599 ~ 26880797 (+)
AMCG00001365 NA other downstream 1859551 26904363 ~ 26954597 (+)

Expression


Co-expression Network