AMCG00001335


Basic Information

Item Value
gene id AMCG00001335
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 25630047 ~ 25636339 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001335
ATGGCTATGAAGCAGAAGCAGAGGCATAAACTCAATCCCAGCACTCCCAGCGCCTGGGCAGAAGAATGTCCCGAAAAGAAGAAAGGCTCCCACAAGCGCTCGGCTTCCTGGGGCAGTACCGACCAGCTTAAAGAGATTGCAAAGTTGCGCCAGCAGCTCCAGCGCAGCAAGCACAGCAGCAGACACCACCGAGACAAAGACCGGCAGTCTCCTTTCCATGGCAACCACGCGGCTATCAACCAATCGCAGGTGAGCACGCGCAGCCCCGCTCAGGGTGTCTTCTTACCTAAAGTCATGATGACCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001335 True 306 mRNA 0.56 3 25630047 25636339

Neighbor

gene id symbol gene type direction distance location
AMCG00001334 NA coding upstream 48671 25552444 ~ 25581376 (+)
AMCG00001332 NA coding upstream 264751 25363893 ~ 25365296 (+)
AMCG00001328 NA coding upstream 327359 25299096 ~ 25302688 (+)
AMCG00001325 NA coding upstream 333189 25246376 ~ 25296858 (+)
AMCG00001330 NA coding upstream 465214 25150764 ~ 25164833 (+)
AMCG00001333 NA coding downstream 27526 25663865 ~ 25673767 (+)
AMCG00001338 NA coding downstream 82565 25718904 ~ 25725679 (+)
AMCG00001348 als2,LOC106574246 coding downstream 385642 26021981 ~ 26069510 (+)
AMCG00001350 NA coding downstream 439231 26075570 ~ 26097013 (+)
AMCG00001349 NA coding downstream 463939 26100278 ~ 26117478 (+)
G130789 NA non-coding upstream 47441 25582342 ~ 25582606 (+)
G130773 NA non-coding upstream 179189 25450516 ~ 25450858 (+)
G130757 NA non-coding upstream 232413 25382179 ~ 25397634 (+)
G130715 NA non-coding upstream 383893 25221616 ~ 25246154 (+)
G130712 NA non-coding upstream 412997 25215938 ~ 25217050 (+)
G130817 NA non-coding downstream 38878 25675217 ~ 25675482 (+)
G130839 nol5,nop58,LOC106575044,LOC106594422 non-coding downstream 91514 25727853 ~ 25729837 (+)
G130884 NA non-coding downstream 424809 26061148 ~ 26062693 (+)
G130948 NA non-coding downstream 660368 26296707 ~ 26335290 (+)
G131017 NA non-coding downstream 1134541 26770880 ~ 26771161 (+)
AMCG00001331 NA other upstream 179737 25423687 ~ 25450310 (+)
AMCG00001315 NA other upstream 1023575 24584179 ~ 24606472 (+)
G130616 si:ch211-114n24.6,LOC107581306,LOC108436424,LOC101061790,LOC103034569 other upstream 1175662 24433793 ~ 24454385 (+)
AMCG00001312 tuba4a,tuba8l4,tba1a,si:ch211-114n24.6,LOC108251627,LOC107714908 other upstream 1183814 24424565 ~ 24446233 (+)
AMCG00001292 ndufs1,LOC107555450,LOC107748553 other upstream 1944926 23565151 ~ 23685121 (+)
AMCG00001337 sumo1 other downstream 99216 25735555 ~ 25749501 (+)
AMCG00001361 NA other downstream 1220260 26856599 ~ 26880797 (+)
AMCG00001365 NA other downstream 1268024 26904363 ~ 26954597 (+)

Expression


Co-expression Network