AMCG00001352


Basic Information

Item Value
gene id AMCG00001352
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 26187889 ~ 26189870 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001352
ATGGCGGAACTACAGATGCTGTTGGAAGAAGAAATCCCGGCAGGACGGAGAGCGTTACTCGACAGTTACACCAACCTCGAAAGAGTCGCCGATTACTGCGAGAACAACTACATCCAGGTACGAGCGCCCGTGTCCGCACCGGGCCGGCGCGAGGGGCCGGGGCTGCCGCGAGCTGCTGCGGCGCGCGGGGGGGCCCGGGACCGGGACCGGGGGCTGGCTCGCGCGCGGGGGTCGCCGGTGCCGCCGGGGCTTCGTCGGGTTTCACCGCTGTGCTGCTTTTGCGGGTGTCTGGAGGTTCAGTGGGACCGGGACCGGGACCGGGACCGGGACCGGCAGTGTTTGATCCCCACGCACAAGCTCTCCGCGCTGCCGGGTCCATTGCGCAGCGGCGGCGGCTGGCGAGGCTGGTCTCTGTTGAAACCGTTGCCCAAAACTATGGAAATCATTTCACAGCAGTCCATAGTGGCAGTACATGAAAATTGTGCTGCTAATGAGAAATCTGGCATCGAGACTCTTCAGATGTGTTCACATGAAATCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001352 True 540 mRNA 0.63 2 26187889 26189870

Neighbor

gene id symbol gene type direction distance location
AMCG00001351 NA coding upstream 47063 26122843 ~ 26140826 (+)
AMCG00001349 NA coding upstream 70411 26100278 ~ 26117478 (+)
AMCG00001350 NA coding upstream 90876 26075570 ~ 26097013 (+)
AMCG00001348 als2,LOC106574246 coding upstream 118379 26021981 ~ 26069510 (+)
AMCG00001338 NA coding upstream 462210 25718904 ~ 25725679 (+)
AMCG00001347 LOC103029249,LOC108423993 coding downstream 41416 26231286 ~ 26268997 (+)
AMCG00001353 NA coding downstream 94590 26284460 ~ 26290848 (+)
AMCG00001355 NA coding downstream 255211 26445081 ~ 26453330 (+)
AMCG00001356 NA coding downstream 291521 26481391 ~ 26488991 (+)
AMCG00001357 NA coding downstream 321687 26511557 ~ 26519285 (+)
G130884 NA non-coding upstream 125196 26061148 ~ 26062693 (+)
G130839 nol5,nop58,LOC106575044,LOC106594422 non-coding upstream 458052 25727853 ~ 25729837 (+)
G130817 NA non-coding upstream 512407 25675217 ~ 25675482 (+)
G130792 NA non-coding upstream 554313 25633234 ~ 25633576 (+)
G130789 NA non-coding upstream 605283 25582342 ~ 25582606 (+)
G130948 NA non-coding downstream 106837 26296707 ~ 26335290 (+)
G131017 NA non-coding downstream 581010 26770880 ~ 26771161 (+)
G131021 NA non-coding downstream 603401 26793271 ~ 26793553 (+)
G131072 NA non-coding downstream 788905 26978775 ~ 26980289 (+)
AMCG00001337 sumo1 other upstream 438388 25735555 ~ 25749501 (+)
AMCG00001331 NA other upstream 737579 25423687 ~ 25450310 (+)
AMCG00001315 NA other upstream 1581417 24584179 ~ 24606472 (+)
G130616 si:ch211-114n24.6,LOC107581306,LOC108436424,LOC101061790,LOC103034569 other upstream 1733504 24433793 ~ 24454385 (+)
AMCG00001312 tuba4a,tuba8l4,tba1a,si:ch211-114n24.6,LOC108251627,LOC107714908 other upstream 1741656 24424565 ~ 24446233 (+)
AMCG00001361 NA other downstream 666729 26856599 ~ 26880797 (+)
AMCG00001365 NA other downstream 714493 26904363 ~ 26954597 (+)

Expression


Co-expression Network