AMCG00001360


Basic Information

Item Value
gene id AMCG00001360
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 26537952 ~ 26545509 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001360
ATGGCCGGATTCGTGCTGGCGGgtAAGGCAGACTGTCCTTACTATGCTAAAGCTGAGCTGCTTGCAGATGTCCTTCAGAGAAACCTTCCCAGCTGTAGCATCCACAAGATCTGCAAACACCCAGAAGACTGGGAGCAATGGCTTCAGGACACTTGTGAGAAGAACGGCTGGAAGCACAAGAGGTCTCCTATAATATGGAGAGAGCTCGTCGACAGAGGAGGAAAAGGGCTGTTTTTAGGCAGCTTTAGTGATTTTATGGAGCATGCACAAGGATATTATGGCATTAGCTCAGACATGATGACTGATCTGATGATGAAAATTGCAACTGAGAATTTACAGACCAAGAAAGATATCATGGAGGAGGAAGCTTATTACAAGAGTCTAATTCAGCCTTTGCACGTATGGATTACCAGCGCTTTGAGTCCAGCATGCTATCACCTCATTCCCTTGCTGGGCCACAGAGGAGTCTTTATGGAAGGCAGCATCAGTCTACACCTTCTGGACACCAGTGGTCGAGAAGAGGAGCTTTGTAGTCTGAAGATGGAGACTGTAGATCTGGCCTTGCCTCTGCTCCATGAGGTCAATGTCCATACAGACCTCACCCAGGCTTTTCTCCATGCAGATGTGGTCATCGTTCTGGACGACGTACAACCAGAGGAAGAGCCGGTCCCGAGAGAGAGCGCCATCAAAGAAATCTCAGAGCGCTGCCGATGCTACGGCCAGCTCATTGATGCCCACTCCCGTAAGGGCGTGCGGGTCATCGTTGCTGGGGATTCCtttgtcaatttaaaatgttacaccTTACAGCAAAACTCTCCTTCTGTCTCCAAGCATCAGTTTGTTGCAGTGGCTGCTCAGCTGGAAAATGAAGCAAGATCAGAACTggcaaagaaattaaatgtgaacaGTGCAGAACTGAAAGACCTTATTGTGTGGGGGAACATCAGCGGAAGCTTTTACATTGATCTTCAAAGAGCTAAGGTCTTTAGATATGATGGCGCCATATGGGGACCTCCAGAATTCTCCCAGTCAGTCTTGGATGTAATATATGACAGCACATGGCTGGAGACTGACTTCTTACCTTCCGTAAGTTCTCATCACCAGACTGTGAAGGCGAAAATACAATGGCCAACAGGTCTCTCTGCAGCACATGGGATAGCTACAGTCCTGCAGTGCTGGAATCAGGATTCACCAATGGGAGAAGTCTTGTCCCTTGGAGTCCCCAGTGAAGGACAGTTTGAAATTCCCGAGGGACTAGTCTTCTCCATGCCAGTGAGATTTCAGGCTGGGACCTGGAGAGTACTATCAGATATTGAAGTCAATAGCACATTGAAAGAGAAATTGAAAAGTGCTGCTAATGAGCTAATAGCT

Function

GO: NA

KEGG:

id description
ko00240 Pyrimidine metabolism
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001360 True 1371 mRNA 0.48 8 26537952 26545509

Neighbor

gene id symbol gene type direction distance location
AMCG00001357 NA coding upstream 18667 26511557 ~ 26519285 (+)
AMCG00001356 NA coding upstream 48961 26481391 ~ 26488991 (+)
AMCG00001355 NA coding upstream 84622 26445081 ~ 26453330 (+)
AMCG00001353 NA coding upstream 247104 26284460 ~ 26290848 (+)
AMCG00001347 LOC103029249,LOC108423993 coding upstream 268955 26231286 ~ 26268997 (+)
AMCG00001363 NA coding downstream 290978 26836487 ~ 26838265 (+)
AMCG00001364 NA coding downstream 459136 27004645 ~ 27042352 (+)
G130948 NA non-coding upstream 202662 26296707 ~ 26335290 (+)
G130884 NA non-coding upstream 475259 26061148 ~ 26062693 (+)
G130839 nol5,nop58,LOC106575044,LOC106594422 non-coding upstream 808115 25727853 ~ 25729837 (+)
G130817 NA non-coding upstream 862470 25675217 ~ 25675482 (+)
G130792 NA non-coding upstream 904376 25633234 ~ 25633576 (+)
G131017 NA non-coding downstream 225371 26770880 ~ 26771161 (+)
G131021 NA non-coding downstream 247762 26793271 ~ 26793553 (+)
G131072 NA non-coding downstream 433266 26978775 ~ 26980289 (+)
AMCG00001337 sumo1 other upstream 788451 25735555 ~ 25749501 (+)
AMCG00001331 NA other upstream 1087642 25423687 ~ 25450310 (+)
AMCG00001315 NA other upstream 1931480 24584179 ~ 24606472 (+)
G130616 si:ch211-114n24.6,LOC107581306,LOC108436424,LOC101061790,LOC103034569 other upstream 2083567 24433793 ~ 24454385 (+)
AMCG00001312 tuba4a,tuba8l4,tba1a,si:ch211-114n24.6,LOC108251627,LOC107714908 other upstream 2091719 24424565 ~ 24446233 (+)
AMCG00001361 NA other downstream 311090 26856599 ~ 26880797 (+)
AMCG00001365 NA other downstream 358854 26904363 ~ 26954597 (+)

Expression


Co-expression Network